KEGG   Chitinophaga agri: GWR21_02770
Entry
GWR21_02770       CDS       T06416                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
chih  Chitinophaga agri
Brite
KEGG Orthology (KO) [BR:chih00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chih03400]
    GWR21_02770
Enzymes [BR:chih01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GWR21_02770
    5.6.2.6  RNA 3'-5' helicase
     GWR21_02770
DNA repair and recombination proteins [BR:chih03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GWR21_02770
SSDB
Motif
Pfam: DEAD Helicase_C Cas3-like_C_2 AAA Helicase_C_2
Other DBs
NCBI-ProteinID: QHS58553
UniProt: A0A6B9ZDH0
LinkDB
Position
complement(716517..718676)
AA seq 719 aa
MSEFSLLSEPIRRYINDKRWEALRPIQAAAIKRILGTEGHYMLVSRTASGKTEAAFLPIL
SKVNFNDEGVQVLYISPLIALINDQFIRVEDLCRYMDVTVTRWHGEANVAAKKQLIRQPE
GVLLITPESIEALFTNHPDHAQRLFSKLKFIVIDEIHTFLGSDRGMHLRSLLSRINDLAT
DKLARIIGLSATVGDYDELKRFTGDVPNTKVLVDGTAKGIHARFMFSKDNDAEYNPFFID
ELYGHVKDSKVLIFPNSRGNAEELAVKLKKTSERKKGHHYYFSHHSAVDKEVREYVEEFA
KNNKRNNFCIACTSTLELGIDIGTVETVIQIDATHSIASLIQRVGRSGRREGQESQLLLY
ATEHWSMLQSFACWELFKESFIEPAYGQAKPFDLLFHQALSILKETNGLSRAVLVQRLHH
NAVFGHFSKAEIDTLLDFMIGAEYVEDLRKELIVGVAGEKLTTSRDFYSMFVSPVMLKVI
YAGNTIGELEFTPMIEVDTNVLLAAKIWKITDVDINARKVFVVPANDGKKPVYNSGSGDV
HPRIRLKMMELLNTDLHPDEADSSAIESINELKLLFKDFKLDHLSSVRPVIVKEKKYVIY
TFTGTKINRTLWFLAKTLNIQHVEVDDRQSKLTIPDKSIDLGELILNMRHQLAGIAQHVS
MYIEEQPEFFPLSKWGVYLPLAMKVEYVLNTTFDIPGTTAFLSELKLVTPAMDDTVIKE
NT seq 2160 nt   +upstreamnt  +downstreamnt
atgagtgagttttcattgctctcggagcctatacgacgatatatcaatgacaaacgatgg
gaagccctgcgaccgatccaggccgccgctatcaaacggatcctgggcaccgaaggtcac
tatatgctggtctcccggacagcctccggtaaaacggaagccgctttcctgcctatcctc
tccaaagtgaactttaacgacgagggggtgcaggtattatacatctctccgctgatcgcc
cttatcaatgaccagtttatacgtgtagaagacctttgccgctatatggatgtcaccgtc
acccgctggcatggcgaggcgaatgtggcggctaaaaagcagttaataaggcaaccggaa
ggagtattactgatcacgccggaatcgatcgaggcgctgttcacaaatcatccggaccat
gcgcaacggctattctccaaactaaaattcatcgtcatagatgagatccatacctttctg
gggagcgacagaggaatgcacctacggtcgctattgtcgaggatcaacgatctggcaacg
gataagctggcacgtatcataggtttatcggcaacagtaggagactatgatgagctcaaa
cgctttacgggagatgtaccgaatacaaaggtgctcgtggacggtacagcgaaagggatc
catgcccggttcatgttcagcaaagacaatgatgcggaatacaaccctttttttatagat
gaactatacgggcatgtgaaggacagtaaggtgctgatcttcccgaatagtcgtggcaat
gcagaagaactggctgtcaaactgaaaaaaacttccgagcggaaaaaagggcaccattat
tatttctctcatcactctgcagtagataaggaagtgagggaatatgtagaggaatttgca
aagaacaataagcgtaacaacttctgtatcgcctgtacctccacactggaactaggtatt
gatattggtacagtagaaactgttatccagatagatgcaactcattccatcgcttctctc
attcagcgggtgggccgtagtggcagaagggaaggccaggaaagtcagttattgttgtac
gcgaccgagcactggtctatgctgcagtcgttcgcctgctgggaactatttaaggagtcg
tttatagaaccagcctatggacaggccaaaccttttgatctgttgtttcaccaggcgctc
tccatactgaaggaaacaaatggattgtccagggctgtgttagtgcagcgactacatcat
aatgccgtattcgggcatttcagcaaagcggagatcgatacactcctcgactttatgatc
ggggcggaatatgtggaagatcttcgcaaagaactgatcgtaggcgtagcaggcgaaaag
ctgaccacctcgcgtgacttctattccatgttcgtatcgcccgtcatgctgaaagttata
tatgcagggaataccatcggcgagctggaatttacgccaatgatcgaggtagacactaat
gtgctacttgcagcgaagatctggaagatcacagatgtagatattaatgcaaggaaggta
tttgtggttcctgcgaatgacggcaaaaagcccgtttacaacagcggtagcggagatgta
catccacgtatccggctgaaaatgatggaattgctaaatacagatctgcatccggatgaa
gctgacagcagcgctatagaaagtatcaacgaactgaagctgctgttcaaggattttaag
ctggatcacctgtcttccgtgcgtccggtcattgtgaaagaaaagaaatatgtcatctac
acttttacagggacaaaaatcaaccggacactctggttcctggccaaaacacttaatatt
cagcatgtggaggttgatgaccggcaaagtaagctcaccataccggacaaatcgattgac
ctgggtgagttgatcttaaatatgcgtcatcagctggccggtatagcacagcatgtaagc
atgtacattgaagagcagccggaattcttccctttaagcaaatggggggtctacttacca
ctggcaatgaaagtggaatatgtccttaacacgacgttcgatattcccggaaccacggcg
ttcctctctgaactaaagctggtcactcctgctatggatgataccgttatcaaagaataa

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