Chitinophaga agri: GWR21_05310
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Entry
GWR21_05310 CDS
T06416
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
chih
Chitinophaga agri
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
chih02022
]
GWR21_05310
Two-component system [BR:
chih02022
]
NtrC family
Unclassified
GWR21_05310
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
AAA
Mg_chelatase
AAA_19
CENP-B_N
nSTAND3
AAA_16
VpsR
MCM
NB-ARC
HTH_7
AAA_7
HTH_17
Motif
Other DBs
NCBI-ProteinID:
QHS59033
UniProt:
A0A6B9ZER7
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Position
1442892..1444235
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AA seq
447 aa
AA seq
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MPGTVLIIDDEEKLRSLMKRIIALEGFNVLEAGNIKSAQKVIDKEEIDVILCDVKLPDGS
GVDYARTIKEKHPSVEVILLTAYGNIPDGVQAIKNGAFDYLTKGDDNNRIIPLLNRALEK
VELQKRIEKLESQVGKKYSFDTILGSSRAIRDAIEQASKVAPADTTVLLLGETGTGKEVF
AQAIHNHSKRIGKPFVALNCSAFSRELLESELFGYKAGAFTNANRDKKGLIEEANTGTIF
LDEIGEMPLDLQSKLLRVLETGEFIKVGDTKPTKVNVRIIAATNRDLKAESEKGHFREDL
YYRLNVFAITLPPLRERKKDIPLLAEFFVGIFSAKINQRKQKITPAFTEKLQLHEWKGNI
RELKNVLERAVIMAGGQDLSVEHLPLDLQVADKSNTSLSAFDLASVEKLHIIRVLHHTKN
NKTEAARLLNIGLATLYRKIEEYGLNN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcccggaactgtcctaataatagatgatgaagagaagctgcgcagcctgatgaaaagg
attatcgcactggaaggttttaacgtactcgaagccggtaatatcaaaagtgcccagaaa
gtaatcgacaaagaagaaatagacgtaatactctgtgatgtaaaattgcctgatggcagt
ggtgtagactatgccagaaccatcaaggaaaaacatccatctgtggaggttattctcctg
actgcctacggtaatattcccgatggtgtacaggcgatcaaaaacggagccttcgactac
ctcaccaaaggcgatgataacaaccgcatcatcccgctgctcaacagggctttggaaaaa
gtggaactgcagaaacgcatcgagaagctggaaagccaggtcggtaaaaaatacagtttt
gacactatccttggtagttcccgtgcaatccgggacgcgatagaacaggccagtaaagtg
gctcccgccgacaccacggtgctgctgctgggagaaaccggtacgggaaaggaagtcttc
gcgcaagccattcacaatcacagcaaacgtatagggaaacctttcgtcgcgcttaactgt
agtgcctttagccgtgaactgctggaaagtgaattatttggctataaagcaggcgctttt
acgaacgccaacagggataagaaaggattgatcgaagaggccaatacgggtactatcttc
ctggacgagatcggggaaatgccactggacctgcaaagtaaactactccgggtactggaa
accggtgagtttattaaagtaggtgataccaaacccacaaaggtgaacgtcaggatcatc
gcagcaaccaacagagatctgaaggcggagtcagaaaaaggccatttccgtgaagacctc
tactaccggttgaatgttttcgccatcaccctccctcccctcagggaaaggaaaaaggat
atccctttgctggcggaatttttcgtcggtatcttctctgccaaaatcaatcagcgtaag
cagaaaataacgcctgctttcacggagaaactacaactgcatgaatggaaaggtaacatc
cgtgaactgaagaacgtgctggaaagagccgtgatcatggccggcggtcaagacctgtct
gttgaacatctgccgctggacctccaggtggccgataagtctaacacttccctatccgcg
ttcgatcttgccagcgtagaaaagcttcacattatcagagtcttgcatcacaccaaaaat
aataagacagaagctgcccgactccttaatattggtttggcgacgttgtacaggaagatc
gaagaatacgggttgaataattag
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