Chitinophaga agri: GWR21_07295
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Entry
GWR21_07295 CDS
T06416
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chih
Chitinophaga agri
Pathway
chih02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GWR21_07295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chih03021
]
GWR21_07295
Transcription machinery [BR:
chih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GWR21_07295
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_40
wHTH_Par
HTH_38
HTH_11
DUF1413
HTH_23
HTH_Mga
HTH_28
Mga
Motif
Other DBs
NCBI-ProteinID:
QHS59396
UniProt:
A0A6B9ZBA9
LinkDB
All DBs
Position
complement(1924095..1924691)
Genome browser
AA seq
198 aa
AA seq
DB search
MHVVQDIDSSLLTALRKGDEFAFRVLYERYWTELYTMAYRRLGDEEAAKDIVQNIFVNLW
TSRKEIFIATSLAPYLNRAVRNKTISFYKKNLASLSRETYFQHEQVQYTPESDLEAKELE
AVINNEISQMSDTMRRAFVLSRQENKSIREIATELSLSEQTIKNNISQALDRLRKKTQLF
YSEPANLLGIAVILLTKP
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgcatgttgttcaagatatagacagttcgttgctgacagctttgagaaagggtgatgaa
tttgcgttcagggtactgtatgagcgttactggacagagttgtacacgatggcctatcgc
aggctgggtgatgaagaagctgcaaaagatattgttcagaatatatttgttaatctctgg
acgtcgcggaaagagatctttattgcaaccagtcttgctccttatctcaaccgtgctgta
cgtaataagactatcagcttttataaaaagaacctcgcttccctgtcaagagaaacctat
ttccagcatgagcaggtacagtatacccccgaatcagacctggaggccaaagagctggaa
gcagttatcaataatgaaatctctcagatgtcagatacaatgcgccgggcatttgtatta
agccggcaggagaataaatctatccgggaaatagctacagaactatcactctccgaacag
accatcaaaaataatatctcgcaggcgcttgaccggttacgtaagaaaacacagttgttc
tattcagaaccagccaatcttttaggcattgctgtcattctgttaacaaagccgtaa
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