KEGG   Chitinophaga agri: GWR21_07295
Entry
GWR21_07295       CDS       T06416                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
chih  Chitinophaga agri
Pathway
chih02020  Two-component system
Brite
KEGG Orthology (KO) [BR:chih00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GWR21_07295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chih03021]
    GWR21_07295
Transcription machinery [BR:chih03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GWR21_07295
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF GerE HTH_40 wHTH_Par HTH_38 HTH_11 DUF1413 HTH_23 HTH_Mga HTH_28 Mga
Other DBs
NCBI-ProteinID: QHS59396
UniProt: A0A6B9ZBA9
LinkDB
Position
complement(1924095..1924691)
AA seq 198 aa
MHVVQDIDSSLLTALRKGDEFAFRVLYERYWTELYTMAYRRLGDEEAAKDIVQNIFVNLW
TSRKEIFIATSLAPYLNRAVRNKTISFYKKNLASLSRETYFQHEQVQYTPESDLEAKELE
AVINNEISQMSDTMRRAFVLSRQENKSIREIATELSLSEQTIKNNISQALDRLRKKTQLF
YSEPANLLGIAVILLTKP
NT seq 597 nt   +upstreamnt  +downstreamnt
atgcatgttgttcaagatatagacagttcgttgctgacagctttgagaaagggtgatgaa
tttgcgttcagggtactgtatgagcgttactggacagagttgtacacgatggcctatcgc
aggctgggtgatgaagaagctgcaaaagatattgttcagaatatatttgttaatctctgg
acgtcgcggaaagagatctttattgcaaccagtcttgctccttatctcaaccgtgctgta
cgtaataagactatcagcttttataaaaagaacctcgcttccctgtcaagagaaacctat
ttccagcatgagcaggtacagtatacccccgaatcagacctggaggccaaagagctggaa
gcagttatcaataatgaaatctctcagatgtcagatacaatgcgccgggcatttgtatta
agccggcaggagaataaatctatccgggaaatagctacagaactatcactctccgaacag
accatcaaaaataatatctcgcaggcgcttgaccggttacgtaagaaaacacagttgttc
tattcagaaccagccaatcttttaggcattgctgtcattctgttaacaaagccgtaa

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