Chitinophaga agri: GWR21_07380
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Entry
GWR21_07380 CDS
T06416
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
chih
Chitinophaga agri
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chih02000
]
GWR21_07380
Transporters [BR:
chih02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GWR21_07380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
QHS59413
UniProt:
A0A6B9ZFS9
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All DBs
Position
complement(1948060..1949526)
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AA seq
488 aa
AA seq
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MTKKNRNKLLITAAVLFTSMTSCDSLLDVTPKGTYTTATYWRSQSDAINGVTGIYNVLLE
EDFTGHAEFTFDDPSDDQYRAGDHSEDVAIENLTYDAGNAQVRFGWKWKYEMINRANSAL
IYIPKIATMDDAIRNRCLGEARFLRAFAYWRLMLIYGEAPVVSEDDVLTGNYNKPKVSID
SLRSMIQTDLLAAADLLPDTYESADRGRLTKGSAWGLLCKLYMYWEKLDQAIVYGEKVIN
SGRYDLAPTYVANFTPETSNNDEMLFAVQTSDIWGYSDFTTYYTPREWNGWNFHQPLKEL
VDEFEANDQRKAVSIMSPGDKINIGTTIATYNANMSETGYHFRKFSYWKPNGGLNYSLKT
PLLRSADIMLLVAEAKIRTAGAGAGDAEINKVRKRAGLDPVAGAGMPALIHERRMELSGE
NERHQDLMRWDKAQLIDITTYYNKPKYGKDNNILVPARTFVRPKHYYFPLPQTEIDKSNG
VLIQNSNY
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaagaaccgtaataaacttttaataacagccgcagtgttattcacgtctatg
acgtcctgcgacagcctcctggatgtaacaccgaaaggtacctatacaaccgctacttac
tggcgctcacagtcagatgccataaacggtgtgacaggtatctataacgtattactggaa
gaggacttcaccgggcatgcggaatttacctttgatgatccttcggatgatcagtatcgt
gccggtgaccactcagaagacgtggccattgaaaacctgacctatgatgcaggtaatgca
caggtacgttttggatggaaatggaagtatgagatgatcaatcgtgcgaacagtgcgttg
atatacattccgaagatcgccacgatggatgatgcgatcaggaaccgttgtctgggagaa
gcgcgcttcctgcgtgcgtttgcgtactggcgactgatgctgatctatggcgaagcacca
gtggtctcggaagatgatgtattgaccggtaattataataaaccaaaggtaagcatagat
agtctgcggagtatgatacagacggacctgctcgcggcggccgacctgttaccggatacc
tatgagagtgcagacaggggccgtttgacgaaaggatctgcctggggtctgttatgtaaa
ctgtatatgtattgggaaaagctggaccaggccatcgtttatggtgagaaggtgatcaac
agcggccggtatgacctggcgccgacatatgtagccaacttcactcctgagaccagtaat
aatgatgagatgctgtttgctgtgcagaccagcgatatctggggctattcagactttacc
acttactataccccacgcgagtggaatggctggaacttccatcagccactgaaggaactg
gtagatgagtttgaggcgaatgatcagcgtaaggccgtgtctattatgtctcctggtgat
aagatcaatataggtaccaccatcgctacctataatgcgaacatgtcagaaacgggttat
cacttccgtaagttctcttactggaaacctaacggaggactgaactattcgctgaagaca
ccattgctgagaagtgcggacatcatgttgctggtagcagaagcaaaaatacggacagcc
ggtgccggagcaggagatgcggagatcaacaaagtgcgtaaaagagcaggactggaccct
gtagctggtgcgggaatgccagcgctgatccatgaacgccggatggaattaagtggtgag
aatgaacgacatcaggacctgatgcgctgggacaaagcacagttgatcgacatcacgacc
tattataataagccaaaatatggtaaggataataatattctcgtgccagcgcgtaccttt
gtgcggccaaagcattattattttcccttgcctcagactgaaatcgacaagagtaatgga
gtgctgatacaaaacagtaattattga
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