Chitinophaga agri: GWR21_09515
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Entry
GWR21_09515 CDS
T06416
Name
(GenBank) T9SS type B sorting domain-containing protein
KO
K20276
large repetitive protein
Organism
chih
Chitinophaga agri
Pathway
chih02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GWR21_09515
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_12
CHU_C
Big_13
LapA
Cadherin_CELSR2_9th
Por_Secre_tail
Motif
Other DBs
NCBI-ProteinID:
QHS59819
UniProt:
A0A6B9ZDI4
LinkDB
All DBs
Position
2473676..2482321
Genome browser
AA seq
2881 aa
AA seq
DB search
MSDTFTKCINRLLLVLFFIVSGVTGYAQYNKSALETGYYYTGIARNQNGDLFAVRSNASG
KYDVVKYAGGAGAGNIIYQNIDVDPPTAPYGIAVNSGGDVFVTSMNSAVTGWEVVKLTYP
SYAPTKILGNNGKYITGLAIDNNDDLLTLEYEGGRYTVRRYPHGNENSAGTTVYATGVPL
GAPPYPSAIAVDSRNNIYFADFPAEARGIIKVKAPFYTTDSIIANGRAFSGLAIDNFDRI
YATEIVSSTASSIIRWNDSSFTTATSVYTNLHNSPGSYPGGVQPMASGKIFATDGVDQEI
VQLTPQTTQIMQVKGLTANPTAANSLSFEVVYSAAPSGIGVGSFSLTTTGVTGASISSIA
PTAEANKYNVYVATGNNSGTIRLNANATGITPTVTNAPMSSATYTIDKDAPSGSFTINGG
AGYTNNPNIVLALTASDVTTSVNRMSFSIDGGSYTTNETFATSKNLTIPATSASHTVDVR
FIDEAGNALQVSRNIVYDDVPPATPVITANPAALTTSGNATFTFTGESGATFEALLDGGA
YAAATSPRTYTGLADGSHTFSVRAVDQAGNLSTTPATYTWTVDATAPAVSSVSVPANGYY
RAGMDMDFKVKFSEVVNVTNAAGNPYINIIIGLTTVQVPYISGTGTDELTFRYTVQAGEN
DADGIAVQPDLRLNSGAIRDAAGNGYAGVQTMPLAGVASTTAVRVNTSIPSVTLSSAANA
ILNAPFSITVTFSEAVTGLVAADFTLTNATAGAPATSDNITYTILVTPTAQGAVSVSLPA
GTVVNIGGNPNTASNTINRTFDNIAPTVTSVDVPANGYYNAGKNLDFTVNFSEDVVVTGT
PRIVLVVGSTSIAADYIGMSGTNGLIFRYTVQSGQQDMDGIQVTGFTPNASTIRDAAGNN
ANTALNNVANTTQVRVNTTSPTVTLSAPLTLTNAPFTVTAAFSEAVTGLNASDFAVTNGT
ADNLQTSDNITYTVTITPAANGAVTVQLPAAAAVNIGDNPTQASNTVSVTADFTAPVVTS
VGITPNGFYNEGQTLDFTVTFSEVVNVTTAGGTPYMAVNLTSGVQPAVYSAGSGTNTLTF
TYTVVAGDMDMDGITLGAGISLGGGGTITDAAGNNANLVLNGVGNSSGVFVNTSHPTVTI
SAAAPSLVNAPFTVNITFSEAVTGLTATDFSIAGATISNIQTTNNITYTALVTPGADGNY
NLSLPANAVVNIGDNGNQASNTYTFTYDATAPVVTGVAVPVNGYYKAGQTLDFIVRFDDD
IIINTTGGNPTLSLTIGTATVNATYTGANGTDGLNFSYTVADGDQDMDGITVGTLALNGA
TIKDVATNDANLTLNNVGNTSAVRVNTTHPTVALSTNAVSPTNAAYTATVTFSEAVTGFV
SGDITVSNATLGAVSTTDNITYTVLVTPTADGAVSLTVPADAAVNIGDNGNSASNTLTLT
YDVTAPVVTSVTVPADGYYKATQQLNFIVNFNENITVNTTGGNPTLSLTIGAATVNATYM
GTSGTNGITFSYIVQNGQEDMDGITVGTLALNGATIQDAATNDVNLTLNSVGNTANVKVN
TTNTTAILSTPATLVNGAFTVTATFGEAVTGLVAGDFVTTNGNVTNLQTADNITYTVTVT
PTTDGAATTVNLPASAAVNVGGNPSQASNTLTVNYDATAPVVTTVGVPANGYYKAGDVLT
FTVNFSENITVTGTPSLGVTIGTATVAATYTGGTGTNALTYAYTVVNGDQDMNGIEVGTL
SLNGGTMKDAAGNNANGTLNSVGATTGVFVNTTHPTVTLSTTAPSLVNAPFTATITFSEA
VTGFAAGDITVANATLSAINTTDNITYTVLVTPTADGVVSLNVSADVAVNIGNNGNSASN
TLNRTFDGTAPVVTSVSVPLPRYYHAGQALNFTVHYDSDISVNTAGGVPTISLEIGSVMV
NATYTGMDGTNGLNFTYTVVNGDEDMNGIIVGTMALNGATIRDAATNDANLILFNTANTS
GVRVNTTHPTVAISTTAPALVNVPFNMTVTFSEAVTGFTGADITATNATVGTPATTDNIT
YTVLVTPTADGAVSLNVPANVAVNIGDNGNSASNTLNLTYDATGPVVTSVTVPADGYYNE
GNTLNFSVTFNEDIAVNIPAGNDPTLSIIIGTATVNATYTGKTAANALGFSYTVVDGDQD
MDGITIGTLTLNGSTVQDAVNNNANLTLNNVGNTTNVKVSTANPTVTLSTTATLVNAPFT
VTAVFSEPVTILTASDFAATNGTVSNVSSTDNITYTATITPTADGAVTVQIPANGVVNTG
GNPNLASNTVTVTNDVTAPVVTAVTVPANGYYKAGDVLNFTVNFSENITAATTGGTPYLT
VTLSTGTVRAGYTGTAANAVTFSYIVRPGDMDLDGITVGTITLNGGTFQDVATNDADVTL
HNIGNTTGVLVHTASPSVQLSTTAASRVNAPFTVTVTFNEAVTGLAIADFTVTNGTAGSL
QTADNITYTVVVTPAVDGAVTIQLPTGTVVNVVGNVNTASNILSLTYDVTAPVVTTGLAF
ETLERSAVGATVGTVTATEVAGTLQNWTIATDDSNGAFAIDANGNITVKDQAKLNAKANS
TVTLTVTVSDGLNTSVATPVTVKVLPVNLAPSLDPISDETVCPSDDIHTINLNGASAGEA
AQTFSFRISTDKPANFDQLSVSSTSGQVTYQLKPTATGTATVTVTIQDNGGTANGGVDTL
RRSFTITVATLGQVDITSDKGNSISKGDVVNLTATGGTIFKWDNATGIISGQNSAVLVVR
PMENTTYRVTVSNAAGCSNTAEFTLNVVEDFKVEATNLLTPNGDGVNDKWVIRNLDSYPD
NELKIYDRAGRLVYTRRNYANEWDGTLNGSPLGEGTYYYILTIQGGAKTAKGYITIIRDR
R
NT seq
8646 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacatttacaaaatgtatcaacaggctactgttggtactattcttcattgta
tccggtgtcacgggttacgcgcaatataacaaaagcgcactcgaaaccggatactactac
acagggatcgcccgcaatcaaaatggcgaccttttcgcggtgcgaagtaacgcatcgggg
aaatatgatgtagtaaaatatgctggcggtgctggcgccggtaacatcatctatcagaac
atagatgttgatccgccgacagccccatatggcatcgccgtcaattcaggtggtgacgta
tttgttaccagtatgaatagtgcggtaacaggctgggaagtagtcaaactgacatatccc
tcctatgctcctaccaaaatattaggcaacaatggcaaatatatcacagggttagccatc
gataataacgatgacctcctcaccctggaatacgaaggcggcaggtatacagtaagacgg
tacccccacggaaatgaaaactccgcgggtacaaccgtgtatgctacaggtgttcctctt
ggagcgccgccctatccgtcagcgatcgctgtagactcccgtaataacatctacttcgcc
gacttccccgccgaagctcgtggtatcattaaagtgaaggctcccttttacacaactgat
agcatcatagctaatggccgtgccttctcaggactggcaatagataactttgatcgtatc
tatgctaccgagatcgtttcttctactgcaagttccatcataaggtggaacgattcaagc
tttacaaccgctacgtctgtttacaccaatctgcataattcccccgggtcctatcccggc
ggcgtacagccgatggcgagtggtaagatcttcgctactgatggtgtagaccaggaaatc
gtacagctaacacctcagaccacgcagatcatgcaggtcaaaggcctgacggcgaatccg
actgcagctaatagcctcagcttcgaggtggtgtatagtgctgctccttccggcataggc
gtcggctcattctccctgaccactaccggcgttacaggtgccagcatcagcagcatcgca
ccgactgcggaggctaacaagtacaatgtatatgtggctaccggcaataattccggcaca
atacgactcaacgccaatgcaactggtatcactcctacagttacaaatgctccaatgagc
agtgcaacttacaccattgacaaggacgcaccttccggtagtttcactatcaatggcgga
gcaggatatacgaataatccaaatatagtactggcactgacggcaagtgatgtaactaca
tcagttaacagaatgtcgttctccattgatggtggatcctatactaccaatgagactttc
gccacaagcaagaaccttacaatacctgctacaagcgcttcgcatacagtagatgtaagg
ttcattgatgaagcaggcaatgcattacaggtaagccggaacattgtctatgatgacgtg
cctcctgcgactcctgtcatcacagctaatcctgcggcattgaccacttcaggcaatgct
acatttactttcacaggcgaatcaggcgcaacttttgaggcgttactggacggtggcgct
tatgcagcagctacaagccctagaacctatacaggtctggcagatggcagtcacactttc
tcagtgagagcagtcgatcaggcaggtaacctgtctaccactccagccacctatacgtgg
acagtagatgctaccgcaccggctgttagcagtgtaagtgttcctgcgaacggttactac
cgtgctggtatggacatggacttcaaagtgaagttcagtgaagtagtgaatgtcaccaat
gcagcaggtaatccttatatcaacatcatcattggactgaccaccgtacaggtaccctat
ataagcggtacgggtacagatgaactgacgttcagatataccgtacaggcaggagaaaat
gatgcagatggtattgcggtacaacctgacctgcgcctgaacagcggcgctatcagagat
gcggcaggtaatggctacgctggtgtgcagactatgccactggccggtgtagcgtctact
acagcggtacgggtaaatacttctatcccgtcagtaacgctgagcagtgctgctaatgca
atactcaatgcaccgttctccattactgttacgttcagcgaggcagtaactggtcttgta
gctgctgacttcaccctgaccaatgcaacggcaggtgctcctgccacttccgacaatatc
acctataccatactggttacgccaacggcacagggtgcggtaagtgttagcctgccagct
ggtactgttgtgaatatcggtggtaatccgaatacggcatctaatacgatcaaccgtaca
ttcgacaatattgctccaactgtaacatctgtagatgtaccagcaaatgggtactacaat
gcaggtaaaaacctggatttcactgttaatttcagcgaagacgttgtagtgaccggcaca
ccacgtatcgtactggttgttggatcaacatctattgctgccgactacattggtatgagc
ggcacaaatggcctgatcttccgttatacggtacagagcggccagcaggatatggacggt
atccaggtgaccggctttacaccaaatgcatcaacaatcagagatgcagcaggtaacaac
gccaacacagccctgaataatgtagctaatactacacaggtaagagtaaacacgaccagc
ccaacggttacactgtctgctccgcttacactcacgaatgctccattcaccgtaacggct
gcattcagtgaagcggtgactggcctgaatgcaagcgacttcgctgttacaaatggtacc
gcggataacctgcagacaagcgacaatatcacctatacagtaaccatcactcctgctgcg
aatggtgccgttacagtacaattacctgcggctgcggctgtcaacatcggtgacaaccct
acccaggcttccaataccgtaagtgttactgctgactttactgctccggtagtaacatcc
gtaggtattactcctaatggtttctataacgaaggacaaacactcgacttcactgttact
ttcagcgaggtggtgaacgtaactactgcaggtggtacaccatatatggctgtaaactta
accagtggcgttcaaccagctgtttacagtgcaggttcaggtactaacaccctgaccttc
acttacacagtagtagcaggcgacatggatatggacggcatcacacttggtgcgggcata
tctcttggtggtggcggtacaattactgacgctgccggcaacaatgcgaacctggtactg
aatggtgttggtaattccagcggtgtgtttgtgaatacaagccatccaacggtgactatc
agcgctgcagcgccttcattggtaaacgctccgtttacggtaaacatcactttcagtgaa
gctgtaacaggtttaacagctaccgatttcagcatcgcaggtgccacgatcagtaacata
cagacgacaaataacatcacctataccgcgctggttacaccaggtgccgacggtaactat
aacctgagtctgccggctaacgcagtagtcaatattggcgataacggtaaccaggcgtct
aacacctacaccttcacatacgatgcaactgcacctgttgtaacaggggtagctgttcct
gtgaatggttattataaagcaggtcagacacttgacttcatcgtaagatttgatgatgat
atcatcatcaatacgaccggtggtaatccaaccctgtcactgactatcggcactgctaca
gtaaatgctacctatacaggcgcaaacggtacagatggtctgaacttcagctacaccgta
gcagatggcgaccaggacatggacggcatcacagtaggtacgctggccctcaatggtgca
accattaaagacgtagctaccaacgatgcgaacctgacacttaacaacgtgggtaacact
tcggctgtaagagtgaacaccacgcatccgacagtagcactctctacgaatgcagtttca
ccaactaatgccgcctatactgcgactgtcaccttcagcgaagctgttacaggtttcgta
agtggcgatatcacagtaagcaatgcaacattaggtgcagttagcactacagacaacatt
acctacaccgtactggtaacaccgactgcggatggcgcggtaagtctgactgttcctgct
gatgcagctgttaacatcggcgataacggcaactccgcatctaataccctgaccctgact
tacgatgttacagctccggttgtaacttccgtgactgttccggcagatggctattataaa
gcgacacaacagctgaatttcattgtaaacttcaatgagaacatcactgttaacacaaca
ggtggtaacccaaccctgtcactgactatcggtgcggctaccgtgaatgctacctacatg
ggtacttccggtacaaacggcatcacattcagctacatcgtacagaatggtcaggaagat
atggatggcatcacagtaggtacactggcactgaatggcgcgaccattcaagatgcggct
accaacgacgtgaacctgacactcaatagcgtaggcaacactgccaacgtaaaagtgaat
acgacgaatacaactgctatactgagcacaccagctacactggtaaatggtgcatttact
gtaaccgctaccttcggcgaagcagtgacaggtctggtggctggcgactttgtcactaca
aatggcaatgttaccaacctgcaaacagcagataacatcacctacaccgttactgtaact
ccaactacagacggtgctgccactacagtaaacctgccggcatctgctgcagtgaatgtg
ggtggtaatccatcacaggcgtccaatacactgactgtcaattacgatgcaactgcacca
gtagtaacaacagtaggtgttcctgcaaatggatattacaaagcaggcgatgtgctgacc
ttcactgttaacttcagtgaaaacatcaccgtaaccggtaccccttcactgggtgtgacc
atcggtactgccactgttgccgctacctatacaggtggtactggtacaaacgcgctgacc
tacgcatacacagtagtgaacggcgaccaggacatgaacggtatcgaagtaggtacactg
tctctgaacggtggtacgatgaaagatgctgctggcaacaatgcgaacgggactctcaat
agcgttggtgctactaccggcgtatttgtgaacacaacgcatccgacagtaaccctgtca
accactgctccttcactggtgaacgcaccgttcacagcgacgatcactttcagcgaagct
gtaacaggtttcgcagcgggtgatatcacagtggctaatgctacactgagtgcaataaat
actacagacaacatcacctacaccgtgctggttacaccaactgcggatggtgtggttagt
ctgaatgtgtctgctgacgtagccgttaacatcggaaacaacggcaactccgcttccaat
accctgaaccgaaccttcgatggtactgctccggtagtaacatcagtgagtgtgccttta
cctcgctattatcatgctggccaggcgctgaacttcaccgttcattacgacagtgatatc
agtgtcaacaccgcaggtggcgttccaaccatttcgcttgaaatcgggtccgttatggta
aacgctacctacactggtatggacggtacaaacgggctgaacttcacctacacggtagtg
aatggtgacgaagacatgaacggtatcatagtaggtacgatggcgctgaatggagctacc
attagagatgcggccaccaacgatgcgaacctgatactgtttaatactgccaacacttcg
ggcgtccgggtaaacaccacacatccgacggtagctatttctactactgctccggcattg
gtgaacgttccgtttaatatgactgtcacattcagcgaggctgttactggctttactggc
gctgacatcactgccaccaatgcaactgtcggcacgccggctactacagacaacatcacc
tacaccgtactggttacgccaactgcggatggtgcggttagcctgaatgtgcctgctaac
gtcgctgtgaacattggagacaacggtaactccgcttccaataccctgaacctgacgtac
gatgcgaccggtccggtagtcacttccgtaacagttccggcagatggttactacaacgag
ggtaacacactgaacttctctgttacattcaacgaggacatcgcagtaaacattcctgca
ggtaatgatccaacactgtctatcatcatcggtacagccactgtcaatgctacctacaca
ggtaaaacagctgcaaacgcgctgggcttcagctacactgtagtagatggtgaccaggat
atggacggtatcactatcggtaccctgacactgaatggttcaaccgttcaggatgcagtt
aataacaatgcgaacctgacacttaacaacgtaggtaacactacaaatgttaaagtaagc
actgccaatcctactgtgacgctgtccacaacagccacactggtgaacgctccgttcacg
gtaacagctgtattcagcgaaccagtaacgatcctgacagcaagcgactttgccgctaca
aacggtacagtatctaacgtgtcaagtactgacaacatcacttacaccgccactataaca
ccaactgccgatggcgctgtcaccgtacagatcccggctaacggagtagttaacactggt
ggcaacccgaacctcgcttctaatactgtcaccgttacaaacgatgttacagctccggtt
gtaacggccgtaactgttccagccaatggttattacaaagcaggagacgtgctgaacttc
actgttaacttcagtgagaacatcacagcagctacaacaggcggcactccttatctgaca
gtcaccctgagcaccggtacagtaagagctggctacacaggtacagcggctaacgcagtt
accttcagctacatcgtacgtccgggcgatatggatctggatggcatcactgtaggcacc
atcaccctgaacggcggtacattccaggatgtagcgaccaacgatgcggatgtgacactg
cacaacatcggtaacactaccggcgtgttggtacacactgcgtctccttcagtacagttg
tctactaccgcggcttcccgcgtaaatgcaccattcactgtaactgttaccttcaacgaa
gcagtgaccggtctggccatcgccgacttcaccgttaccaacggtactgctggcagtctg
caaacagcagataacatcacttacacagtagtggtaacaccagctgttgacggtgctgta
accatccagctgccaaccggtacagtggtgaacgttgttggtaatgtaaacacagcatcc
aacatcctcagtctgacctacgacgtaacagctcctgttgttacaacgggtctggcattt
gaaacgctggaaagaagtgcagtaggtgctactgtcggtactgtaaccgctactgaagtg
gcaggcaccctgcagaactggactattgcaactgacgattctaatggcgccttcgctatc
gacgcgaatggcaacatcacagtgaaagaccaggcgaaactgaacgctaaggcaaacagc
actgtcaccctgactgttacagtcagcgacggactgaacaccagcgtagcaacaccggtt
actgtgaaagtactgccggtgaatctggctccaagcctcgatccgatcagtgatgagact
gtttgtccttcggacgacatccacacgatcaacctgaacggcgcttccgcaggagaggct
gcacagaccttctccttcaggatcagcactgataaaccagctaacttcgaccagctgagc
gttagctcaacttcaggtcaggttacctatcagctgaaacctacagctaccggaacagct
actgttactgttactatccaggataacggcggtacagctaacggtggtgtagatacgctg
cgccgttcattcactatcactgtagctaccctgggccaggtagacatcaccagcgataaa
ggcaactccatctctaaaggagatgtggttaacctgaccgcgaccggtggtactatcttc
aaatgggataacgcaactggcattatcagtggccagaacagcgcggtactggtagtaaga
ccaatggagaacacgacttaccgtgtgacagtaagcaacgctgcaggttgcagtaacact
gctgaattcacgctgaatgtagtcgaagacttcaaggtggaagcgaccaacctcctgacg
ccaaatggtgatggtgtgaatgataaatgggtgatccgtaatctggacagctatcctgat
aatgaactgaagatctacgaccgcgcaggccgtctggtttacacacgcaggaattacgca
aatgagtgggatggtaccctgaacggcagtccgctgggcgaaggtacttactactacatc
ctgacaattcagggcggtgctaaaacagcaaaaggttatatcacgattatcagagacaga
agataa
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