KEGG   Chitinophaga agri: GWR21_11945
Entry
GWR21_11945       CDS       T06416                                 
Name
(GenBank) Fpg/Nei family DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
chih  Chitinophaga agri
Pathway
chih03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:chih00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GWR21_11945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chih03400]
    GWR21_11945
Enzymes [BR:chih01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     GWR21_11945
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     GWR21_11945
DNA repair and recombination proteins [BR:chih03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     GWR21_11945
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco NFACT_N Ribosomal_S13
Other DBs
NCBI-ProteinID: QHS60288
UniProt: A0A6B9ZD75
LinkDB
Position
complement(3045149..3045928)
AA seq 259 aa
MPELPDLQVFSHNLDKQLSGKVVKEVHIKNTKRAKESAAAFRKALEGEKLEKVYREGKEL
RFKFKHDVVLGMHLMLHGKLFFFEEENTNKHPIIELLFEDKTGLVLTDYQGMAVPTLNPE
EVDVPDALSDDMTVKFLQEQLSKKKTVVKKVLLDQHIIRGIGNAYADEILWEAGISPFSV
SNKIPAAKIKALHTAIHKVLKEAEKDIRKAHPDIIAGEVRDFLKIHQPKLTHSPTGGAIA
QKELNGRKTYYTDEQELFE
NT seq 780 nt   +upstreamnt  +downstreamnt
atgcccgaattaccagacttacaggttttcagtcacaacctggacaaacagttgtccgga
aaagtggtgaaagaagtacacataaaaaatacgaagagagccaaggaaagtgcggctgct
tttagaaaagcactggaaggagagaagctggaaaaggtgtacagggaaggcaaggaattg
cggtttaagtttaagcatgacgtagtgctgggaatgcacctgatgctgcatgggaaactg
tttttcttcgaagaagagaataccaataaacaccccatcattgaactgttgtttgaggat
aagaccggccttgtgctgacagactaccaggggatggcagtacctaccctcaacccggaa
gaagtggatgtgcctgatgcactatcggacgatatgaccgttaaattcctgcaggaacaa
ctcagtaaaaagaagacagttgtgaagaaggtgttactggatcagcatatcatcaggggc
atcggaaatgcctatgcagatgagatcttatgggaggcaggtatatcccctttttccgtc
agtaacaagatacctgctgcaaagatcaaagcactacatactgctatccataaggtgctg
aaagaagcggagaaagatattagaaaagctcacccggatatcatcgccggtgaagtacgc
gatttcctgaaaatacaccagcctaaactaacgcatagtcctacagggggcgccattgct
caaaaggagctgaatggccgaaaaacctactatacggacgaacaggaactattcgaataa

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