Chitinophaga agri: GWR21_12050
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Entry
GWR21_12050 CDS
T06416
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
chih
Chitinophaga agri
Pathway
chih03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GWR21_12050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chih03019
]
GWR21_12050
03016 Transfer RNA biogenesis [BR:
chih03016
]
GWR21_12050
Enzymes [BR:
chih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GWR21_12050
Messenger RNA biogenesis [BR:
chih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GWR21_12050
Transfer RNA biogenesis [BR:
chih03016
]
Prokaryotic type
tRNA degradation factors
GWR21_12050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
RNase_II_C_S1
HutF_N
Motif
Other DBs
NCBI-ProteinID:
QHS60308
UniProt:
A0A6B9ZD94
LinkDB
All DBs
Position
complement(3066497..3068884)
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AA seq
795 aa
AA seq
DB search
MNLTPISVNFDIGDGRIVTIETGKLARQADGAVTVRLGNCILLATVVAAKTPKPGQSFFP
LTVDYQEKFASAGRIPGSFFKREGKLSDYEVLISRLIDRALRPLFPDDYFCEVQVLVSLI
SSDPEVMPDALACLAASAALAVSDVPIQEIISEVRVARIDGELVINPNRTPLEKADMDFI
IGATDKNIMMVEGESKECSEEDIIKAIEIAHNAIRVQVKAQEELRAKAGVTGKRAYDLPY
ANEELKAKIADFAKDRILGVARSASAKHDRADAFDKISEELVEHLGELPEEDAPLVGKYF
HSLEKEVIRNMILDESIRLDGRKLDQVRPLVMETDILPSPHGSALFTRGETQSLTTVTLG
TPDDELLIESAANSKYTKFILHYNFPPFSTGETKPMRGPGRREVGHGNLAMRSLRQMMPG
SEYAYTVRVVSDILESNGSSSMATVCAGSLALMDAGVPLPKHVSGVAMGLISRAGDGKWA
VLTDILGDEDHLGDMDFKVTGTRDGICGIQMDIKVDGLSMDVMRKALEQARHGRLHIIDA
MYACMEAPRPEPKPHAPRMEKLIIDREFIGAVIGPGGKVIQEIQRETGTTINIEEVGETG
EVSIFSAQKEGLMKALEWIKGIVAVPEIGEVYESTVKSVMPYGAFVEFLPGKQGLLHISE
VSWKRLETMDGVLTEGEKVKVKLVGTDPKTGKFKLSRRILMPKPEGYVERPEGGERGDRG
DRGDRGDRGDRGDRGDRGGRPPFRNDRGGDRDRGGDRGDRRGPRDGGDRGGDRDRAPRPN
APENDNPQEPVFDEE
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgacacctatctcagttaatttcgatataggagatggccggatcgtgaccatt
gaaactggtaagttagcccgccaggcagatggtgctgttacggttcgtctgggcaactgt
atcctgttggctaccgttgttgcggcgaaaactcccaaacctggtcagtctttcttcccc
cttactgttgattaccaggaaaaatttgcttctgcaggacgtatccccggctctttcttc
aaacgcgagggaaaactgtctgattatgaagtgctgatttcacgtttgatcgaccgcgca
ctgcgcccactgttccctgatgattatttctgcgaagtacaggtactggtttccctcatt
tcttccgatccggaagtgatgccggatgccctggcttgtctggctgcatctgctgcactg
gcagtatctgatgtgcctatccaggaaattatctccgaagtaagagttgcccgcatcgac
ggtgaattagttataaatccgaaccgtactccgctggaaaaagcagacatggacttcatc
attggtgctactgacaagaacatcatgatggtggaaggtgaaagtaaggagtgcagcgag
gaagatattatcaaagcaatcgagatcgcgcacaacgctatccgcgtacaggtgaaagca
caggaagaactccgtgcaaaagctggcgtaaccggcaaacgtgcatacgacttaccatat
gcgaatgaggaactgaaagctaaaatcgctgatttcgctaaagaccgcattctcggcgta
gcaagatctgcttccgcgaagcatgatcgtgcagacgcattcgataagatcagcgaagag
ctggtagaacacctgggtgagctgcctgaagaagacgctccactggtaggtaaatacttc
catagcctcgaaaaggaagtgatacgtaacatgatcctggatgaatctatccgtctggat
ggccgtaaactggatcaggtacgtccgctggtaatggaaacagatatcctgccttctcca
cacggttctgcactgttcacacgcggtgaaacccagtccctgaccacagtgaccctgggt
acgccggatgatgagctgctgatcgaaagcgcagctaattccaaatacactaagttcata
cttcactataacttccctccgttctctacgggtgaaaccaaaccaatgcgcggccctggt
cgtcgtgaggtgggtcacggtaacctggcgatgcgttccctgaggcagatgatgccaggt
agcgaatacgcttataccgtacgtgtagtatccgatatcctcgagtctaacggttcctct
tccatggcgacagtatgtgctggttccctggcactgatggacgctggtgtgcctttgcct
aaacacgtttccggtgtggcaatgggcctcatctcccgcgctggtgatggtaaatgggct
gtactgaccgacatcctcggtgatgaagatcacctgggtgatatggacttcaaagtaacc
ggtacccgtgacggtatctgcggtatccagatggatatcaaggtagatggtctgagcatg
gacgtaatgcgtaaagcactggagcaggcacgtcatggccgtctccacatcattgacgct
atgtacgcctgcatggaagcacctcgtccggaaccaaaaccacatgctcctcgtatggag
aaactgatcatcgaccgcgaatttatcggtgctgtgatcggaccaggtggtaaagtaatt
caggaaattcagcgtgaaaccggtactaccatcaacatcgaagaagttggtgaaaccggt
gaagtaagcatcttctccgcacagaaagaagggctgatgaaagcgctcgagtggataaaa
ggtatcgtagctgtacctgagatcggcgaagtctacgaatcaactgttaagtcagtaatg
ccttacggtgcgttcgttgaattcctgcctggtaaacaaggtttgctgcatatctccgaa
gtttcatggaaacgccttgaaacaatggatggtgtactgaccgaaggtgaaaaagtgaaa
gtgaaactggtaggtaccgatcctaagactggtaagttcaaactgagccgtcgtatactg
atgccaaaaccagaaggttatgtagaaagacctgaaggtggagagcgcggtgaccgtggc
gacagaggtgatcgcggcgacagaggcgatcgtggtgacagaggtgaccgcggtggacgt
cctcctttccgtaacgaccgtggcggtgaccgtgatcgcggtggcgaccgtggtgatcgt
cgtggcccacgtgatggtggcgaccgtggcggtgatcgtgatcgtgctcctcgtcctaat
gctcctgagaacgataatcctcaggaaccagtatttgacgaagaatag
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