Chitinophaga agri: GWR21_12275
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Entry
GWR21_12275 CDS
T06416
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
chih
Chitinophaga agri
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chih02000
]
GWR21_12275
Transporters [BR:
chih02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GWR21_12275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Reoviridae_Vp9
Motif
Other DBs
NCBI-ProteinID:
QHS60351
UniProt:
A0A6B9ZFX9
LinkDB
All DBs
Position
complement(3119693..3121159)
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AA seq
488 aa
AA seq
DB search
MTKKILSILIVIPVLIFSSCSKDYLETNPTDAYPSGSVFSNIAGAWSAINGIHRSLYIQY
DSQDQGGQGSIMINNDMLGDDLVMTAAGNGWFNSQYQWVTHRTTSAGFLKYTYYFYYKII
ANANMIITNIDNVDGDPAEKKIIKGQALAYRSWAYWNLVQMYGKRFDATGNNSQLGVPLV
LTNTVEPLPRATVAQVYTQINHDIDSAVVNLAGYNGDNRSHISVQVAKGIKARIALTQQD
WATAEKYAAEARAGVSLMSNADYLKGFNDYNNAEWIWGSHHIAEQTTYFYSFYAFMSANY
NSSNIRTNPKAINSVIYEKMGPADVRRQVFSPDGTNVPVPSGGITAPYINKKFLVATSGS
NGDVPLMRAAEMYLIEAEAKVRQNDNAGAADVLYTLMVNRDPNYVKSTNTGEALLEEILV
NRRIELWGEGFRFYDLKRMNQALDRRGANHSPTLTNNLMQVPAGDIRWEFLFPQDEINAN
GNIQQNDL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgactaagaaaatattatctatactcatagttataccggtattaattttcagttcctgt
agcaaggactatcttgaaactaatccgactgacgcatatccttccggttctgtattcagc
aatatcgcgggtgcatggtctgccatcaatggtattcaccgttccctgtatatccagtac
gatagccaggaccagggtggacagggtagcatcatgatcaacaatgacatgctgggcgat
gatctggtaatgaccgctgctggtaacggttggtttaactcccagtatcaatgggtgacc
catcgtactacatcagctggattcctgaaatacacttactatttctactacaagatcatt
gccaatgcaaatatgatcatcaccaatatcgataatgtagacggtgatcctgctgaaaag
aagatcatcaagggacaggcgctggcatatcgttcctgggcttactggaacctggtgcag
atgtacggtaaacgttttgatgcgacaggtaataacagtcagctgggcgtaccgcttgta
ctgaccaatacagtagaaccgttaccaagagcgaccgtagcacaggtatacacacagatc
aatcacgatatcgactctgctgtggtgaatctcgcgggttataacggcgataacagatca
catatcagcgtacaggtagcaaaaggcatcaaggcacgtattgctttaactcagcaggat
tgggcgactgccgaaaaatatgcagcagaagccagagcaggtgtatcactgatgtcgaat
gcggattacctgaaaggattcaatgattataataatgcggagtggatctggggtagtcat
cacatagctgagcagacaacctatttctattcattctacgcatttatgtctgcgaactac
aactcttctaacatcaggaccaatcctaaagcgatcaactccgtgatctatgagaaaatg
ggcccggcagatgtacgcagacaggtattcagcccggatggaaccaatgtacctgtacct
tccggcggtattacagcaccttatatcaacaagaaattcctggtggccacctctggtagc
aacggggacgtaccgttgatgcgtgcggctgaaatgtacctgatagaagccgaagcaaaa
gtgcgtcagaacgataatgcaggtgcagcagatgtattgtatactttaatggtgaaccgt
gatccgaactacgtgaagagcacgaataccggtgaggcactgctggaggagatcctggta
aaccgccgtatagagctgtggggagaaggtttccgtttctatgacctgaaacgtatgaac
caggcacttgacaggagaggcgcgaaccattcgcctacactgacgaataatctgatgcag
gtacctgcaggggatatccgctgggagttcctgtttccgcaggatgagatcaatgcaaat
ggtaacattcagcagaacgatctgtaa
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