Chitinophaga agri: GWR21_13690
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Entry
GWR21_13690 CDS
T06416
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
chih
Chitinophaga agri
Pathway
chih03030
DNA replication
chih03430
Mismatch repair
chih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GWR21_13690
03430 Mismatch repair
GWR21_13690
03440 Homologous recombination
GWR21_13690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chih03032
]
GWR21_13690
03400 DNA repair and recombination proteins [BR:
chih03400
]
GWR21_13690
Enzymes [BR:
chih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GWR21_13690
DNA replication proteins [BR:
chih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GWR21_13690
DNA repair and recombination proteins [BR:
chih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GWR21_13690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
DUF655
Motif
Other DBs
NCBI-ProteinID:
QHS60607
UniProt:
A0A6B9ZER1
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All DBs
Position
3475143..3478091
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AA seq
982 aa
AA seq
DB search
MFLNCKTFFSLRYGTIDTKDLVKYAREMGVTSLALTNINITSDTWNFVKECQENGIKPII
GLECRNGHQLKYILLARDLDGWFYINRFLSDHLHKGLDFPDRAPGFPGVFAIYTWNTVPL
QDLYDHELVGIRKRDINKLFRVNTTEWKDKLVILHPVTFQNDDYYQLHRVLRAVDQNILI
SQLEPHTTAHPDEQFLSPAALFDCFEQYPDIISNTVRIMDACRIQFDFKTPRNKKYFTSS
EAEDHALLRKLAYEGMLERYGPDNAEAKERIEKELEVVQGQHFNGYFLITWDIIRYARES
GFFYVGRGSGANSILAYCLKITDVDPIALNLYFERFLNPYRSSPPDFDIDFSWKDRDEII
EYVFKKYGAAHTALLGTVTTFQQNAVIRELGKVYGLPKHEIDKILDTPFAPDLSGDSVQQ
TILRYSKMMSNDNKSFPNHLSIHAGGILISEAPIHQHCSTYLPPKGFSTAQLDMHQAEAI
GLFKFDILSQRGLGHIRDAISIIKENKGDEVDIHDVKSFMRDERVKQALQTVNTIGCFYI
ESPAMRQLLQKLQCGDYLTLVAASSVIRPGVAQSGMMRQYVHNYRNQDKVEYLHDIIKEV
LSETFGIMVYQEDVIRIVSRYAEMDLADADILRRAMAGKYRGQGDFQKIEQQFFSNCKQL
GRPEAVTAELWRQISSFSGFSFSKAHSASFAVESYQSLFLKTYYPAEFMVAVINNFGGFY
NRELYFRELQKTGADIKPPCINNSDYYTRITGNTVYTGFIHIEGLEEKWMEQVLEERKQY
GPYTSLEDFTTRIAPPPEQLDILIRIGAFNFDNYTKKELLWKSSLLLKAKTPHAEHIQPL
FQEELPDCQLPMLSYTEHENAFEEIALLGFPLCSPFSILQHDQRRYITADAFKRYEGKTI
TALGYLVCTKGIYTSKGIPMSFGTFMDVNGDFIDTVHFPDILRAYPFQKNGFYILQGKVT
AEYDVYSIEISYMRKIGYFEDK
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcaactgcaaaacattcttcagtctgcgctacggcaccatcgatacaaaagat
ctggtgaagtatgcccgcgaaatgggtgtcacttcccttgccctcacaaatatcaatatc
acttccgatacctggaacttcgtaaaagaatgtcaggaaaacggcattaagcctattatc
ggactggaatgcaggaacggccaccaactgaaatatatactgctggcacgcgacttagac
ggatggttttatatcaacaggttcctgtcagatcacctgcataaagggcttgactttccc
gaccgcgcacccgggtttcccggcgtgtttgccatttatacatggaataccgttccacta
caggatctctatgatcatgaactcgtcggcatccgcaaacgtgacatcaataaactgttt
cgtgtaaacaccactgaatggaaagacaaactcgttatcctccacccggtcacctttcag
aatgatgattactaccagttgcatcgtgtgttacgtgccgttgatcagaatattcttatc
agtcagctggagccgcataccacggcacatccggacgagcagttcctgtcaccagctgct
ttgtttgactgcttcgaacaataccccgacatcatcagtaataccgtacgtattatggat
gcctgccggatacagtttgattttaaaacaccccgcaataaaaaatactttaccagcagc
gaagcagaagaccatgccctgctacggaagcttgcctatgaaggcatgctggaacgctat
ggtcctgacaacgcagaggcgaaggaacgtattgaaaaagaactggaagttgtacaggga
caacatttcaacggctatttcctgatcacctgggacatcatccgatatgcgcgggaaagc
ggctttttttatgttggacgaggcagcggcgccaattctatcctggcctattgtttaaaa
ataacagatgtcgatccgatagcacttaatctctatttcgaaagatttcttaacccatat
cgtagttcacctcctgattttgatatcgacttttcctggaaagacagggatgagatcatt
gagtatgtattcaaaaagtacggtgctgcgcataccgccttactgggtaccgtcactacc
ttccagcagaatgcagtgatacgtgaactgggaaaagtttacggattacctaaacatgaa
atagacaaaatactggacacgccatttgcacctgatctctcaggcgatagcgtacagcaa
accatcctgcgatatagtaagatgatgtctaacgacaataaatcctttcccaatcatctc
agcatccatgcggggggtatactgatcagcgaagcgcctatccatcagcattgcagtacg
taccttcctcccaaaggattcagtacggcccaactggacatgcatcaggcggaggctatc
gggctattcaaatttgatatacttagtcagcggggcctgggacatatacgcgatgcgatc
agtatcatcaaggaaaataaaggcgatgaagttgatattcacgacgtaaaatcattcatg
cgtgatgagcgtgttaaacaggcattgcagacggtcaacacgatcggatgtttttatata
gaatctccggctatgcggcagttgttacaaaaactgcaatgcggtgactacctgacactg
gtagccgccagttctgttatacgtcctggtgtcgcacaatcaggtatgatgcggcaatat
gtgcataactatcgtaatcaggataaggtagagtatctccatgacatcatcaaagaggta
ttgagtgaaaccttcggcatcatggtctaccaggaagatgtgatcaggatagtaagccgg
tatgcagaaatggatctggcagatgcagatattctgcgaagagcgatggccggtaagtac
cgcgggcagggagactttcagaaaatagaacaacagttcttcagcaactgtaaacagctg
ggaagaccagaagctgtgacggctgaactatggcggcagatatcgagcttctccggtttc
tctttttcaaaggcccactctgccagcttcgcggtagagagctatcagagccttttcctg
aaaacatattatccggcggaattcatggtagccgtgatcaataacttcggtggcttttat
aacagggaactctatttccgggaattacaaaaaaccggtgccgatatcaaaccaccctgt
atcaacaacagtgactattacacgaggatcaccggtaatactgtgtatacaggatttata
cacatcgaaggactcgaagaaaaatggatggaacaggtgctcgaagaacgtaagcagtac
ggtccctataccagtctggaagacttcactacccgtatagcgcccccaccggaacagctg
gatatactcatccggatcggcgcttttaatttcgacaactacacaaagaaagagctcctg
tggaaaagcagcctgttactgaaagccaaaacaccacatgcagagcatatacagccgctg
ttccaggaagaattaccagattgccagctgcccatgctgtcttataccgaacatgaaaat
gcatttgaggaaatagccttgctgggctttccgttgtgctctcctttttctattctgcaa
catgatcagcgtagatatattacagccgatgccttcaaacgctacgaaggaaaaacgatt
acagccctgggatatctggtatgtacaaaaggcatttataccagcaaaggcatacctatg
agcttcggtacctttatggatgtgaacggagactttattgatacggtacattttcctgat
atcctgcgtgcctaccctttccagaaaaacgggttttacatcctgcaggggaaggtcacc
gctgaatatgatgtctattcaatagagatcagttatatgcggaaaatcggctactttgag
gataaataa
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