Chitinophaga agri: GWR21_15270
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Entry
GWR21_15270 CDS
T06416
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
chih
Chitinophaga agri
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chih02000
]
GWR21_15270
Transporters [BR:
chih02000
]
Other transporters
Pores ion channels [TC:
1
]
GWR21_15270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
TonB_dep_Rec_b-barrel
CarboxypepD_reg
CILP
Motif
Other DBs
NCBI-ProteinID:
QHS64017
UniProt:
A0A6B9ZPN6
LinkDB
All DBs
Position
complement(3843112..3846033)
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AA seq
973 aa
AA seq
DB search
MLFLSLMAVAQNRTITGKVTDAQGNTPLPGVTVQVKGTSKGTQTGPDGTYKLEAPDSATT
LIFTFVGYKRTEQQISTAGATNVSLPPDVTALKDVVVVGYGTQKKSEVTSAVTSINAEEF
RQSGARNAMDLVQGKVAGLQITRQGGTNPNSGVTLQLRGVTSLTGSSSPLVVIDGIPGGN
LDLLQQDDIASISVLKDGSAAAIYGTQANGGVILITTKRGKSGPTRVDYNSYVRKEFVQR
RPKFLTPDQYAAKLASGEIIATDKGHRTDFVDLLVDHGNLTQNHNLSFSGGNESTTYRAS
VYYQDLQGIMKANTRQQYGGRLSLNTRGLNDKLSAQFNLASNFNKADLLGGGGALQGYYT
FNPTYSPWNDDGTWYFERTSTNELARLHQETNRRQQQTTSGDAKVSLDMVKGLRASLFGS
VQRDSYIDGAYRQLASESSVEDYQSSGFASQNSELKIKYAVEPTLEYNIRVHDDHNITAI
AGYSYRYEVNQGFNASNYGFVNDLLEENNLEDGIQLGLGKAKMESYKNDNTLIAFFGRVN
YSYKDKYLASLILRREGSSRFGVNNKWGNFPAASIGWNLSKEDFMSEVTFIDDLKLRAGY
GVTGNSGIDNYSSLVTMGKGGTYINPDGIWRQTYGPNKNPNPNLKWEKKAEYNIGVDYSM
FKGRLSGSIDVYRRVTTDVLETFDSQLPPFVTDKIYANVGTISGRGLEITVSGAPVKNKH
FSWNADLAFSTARTTLDKFSNDIYKIARKEYGEIGGYGALGYAIRTYEHDRLGNFYGKRF
AGFTEDGKWLFYKKDGTTARPEDINREEDYAVIGNAIPKYYLSLTNTFRYKGFDLRVFMR
GKFGYDVLNTMEMFYGTKQSLPNNVLETAFTKHAQLKDSYQYSDYYLEKGGYMKLDEVTI
GYTVPLHGNKWVKNVRFYLTGSNLATITKYTGNDPDFIKDTGLNPGIDAINTSDERTPYL
STRGFLAGLSVSF
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgttattcctgtcgctgatggccgttgcccaaaaccggaccatcaccggtaaagttact
gatgcgcagggaaacacaccattgccgggcgtcaccgttcaggtcaaaggtaccagcaaa
gggacacagaccggtcctgatggtacctataaactggaagcaccagatagtgccactaca
ttgatttttactttcgtcggatataaaagaacagaacagcagatcagtactgcgggtgca
acgaatgtgagtttgccgcccgatgtgacagcattgaaagatgttgtcgttgtaggttac
ggtacacaaaagaaatctgaagtgacttccgcagtgacctccatcaatgctgaagaattc
cgtcagagtggtgcgcgtaatgctatggaccttgtacagggtaaagtagccggtttacag
atcacccgccaggggggaacaaacccgaattcaggtgtcaccctgcagttgcgcggtgta
acatccctgactggtagttcttctcctctggttgtcatcgatggtattccgggtggtaac
ctggatctgttacaacaggatgatattgcttccatctctgtactgaaagatggttctgct
gcagctatttacggtacacaggccaacggtggtgtaatattaattaccaccaaacgtggt
aaatctggccctacccgtgtagattacaacagttatgtacgtaaggagtttgtacagcgt
cgtccgaaatttctgacgcccgatcaatacgcggcgaagctggccagtggcgagatcatc
gctaccgataaaggccatcgtactgattttgtagacctgcttgtagatcatggcaatctt
acacagaatcataacctgtcattctccggtggtaatgaaagtacaacgtatcgtgccagt
gtttactaccaggacctgcagggtattatgaaagccaatacgcgtcagcagtatggcggc
cgtctgagtctcaataccagaggtctgaacgacaaactgagtgcgcagttcaacctggcc
agcaacttcaataaagcagacctcctgggtggcggtggcgccctgcagggatattataca
ttcaaccccacctactctccatggaatgacgatggtacctggtactttgaacgcaccagt
accaacgaactggcccgtttacaccaggaaactaacaggcgccagcagcaaacaacttcc
ggtgatgcaaaggtatcgctggacatggtgaaaggcctcagagcatccctgtttggttct
gtacaacgtgatagttatatcgatggtgcctacagacaattagcatctgaatcatcggta
gaagattatcagtcttccggttttgcttctcagaacagtgagctgaaaattaaatacgca
gtagagcctacactcgaatataatatccgcgtgcacgacgatcataacatcaccgcgatc
gccggttacagctaccgttatgaagtgaaccagggctttaatgccagtaactatggcttt
gtaaatgacctgctggaagaaaataacctggaagatggtattcagcttggattaggtaaa
gccaagatggaaagctataaaaatgataacacactgatcgcattcttcggcagggtgaac
tactcctataaagataaatacctcgcaagtttaatattgcgccgtgaaggttcttcccgc
tttggtgtgaacaacaaatggggaaacttccctgctgcttccatcggatggaacctgagc
aaggaagacttcatgagtgaagtgacctttatcgatgacctgaaactgagagcaggttat
ggtgtcactggtaactcaggtattgataactacagctcactggttaccatgggaaaaggc
ggtacctacatcaatcccgatggtatctggcgccagacatatggtcccaacaagaaccct
aatccgaacctgaaatgggaaaagaaagcggagtataacatcggtgtggactacagcatg
ttcaaaggccgcttatcaggttccattgacgtatacagaagggtgacaaccgacgtactc
gaaaccttcgactcacaacttcctccatttgtaacagacaagatctatgcgaatgtcggt
actatctccggtcgtggtctggagatcactgtcagcggtgcacccgttaaaaacaaacac
ttctcctggaatgcggatctcgcattcagtacagcacgtactacactggataaattctcc
aatgacatctataaaattgcccgtaaagagtatggggaaataggtggctatggtgcattg
ggttacgccatcagaacctatgaacacgaccgcctcggcaacttctacggtaaacgtttc
gccggatttacagaagatggtaaatggctgttttacaagaaagacggtaccactgcacgt
ccggaagatatcaacagggaagaggactatgcagtgatcggtaacgcaatacctaaatat
tatctgtcactgaccaacaccttccgctacaaaggatttgacctgcgggtattcatgcgc
ggtaagttcggatatgatgtgctgaacaccatggaaatgttctacggtacaaagcagtca
ttgcctaataatgtactggaaactgctttcacaaaacatgcacagctgaaggatagctat
cagtattctgactactacctggagaaaggtggttacatgaaactggatgaagtgaccatt
ggttataccgtaccactgcatggaaataaatgggtgaaaaacgtgcgtttctatctgact
ggttctaacctggcgaccatcaccaaatatacaggtaatgatcctgactttattaaagac
actgggctgaatccaggtatcgatgcgatcaataccagcgatgagcgtaccccttatctg
agcaccagaggcttcctggccggtttgagtgtaagtttctaa
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