Chitinophaga agri: GWR21_15525
Help
Entry
GWR21_15525 CDS
T06416
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
chih
Chitinophaga agri
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chih02000
]
GWR21_15525
Transporters [BR:
chih02000
]
Other transporters
Pores ion channels [TC:
1
]
GWR21_15525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
Plug
CarboxypepD_reg
CooC_C
TTR_TEN1-4
Big_1
MetallophosN
phage_tail_N
Motif
Other DBs
NCBI-ProteinID:
QHS64020
UniProt:
A0A6B9ZNM5
LinkDB
All DBs
Position
complement(3912480..3915425)
Genome browser
AA seq
981 aa
AA seq
DB search
MQAAVAGLPTPAGMAKIITGVVTDEKGEPLPGVSIVVKSSRAGTMTNEKGIFSLDARSES
DTLLISYIGYRTQEVAVKGRSQLNVQLVLSENSLADVVVIGYGSLRKGDLTSAVATVKSE
SFVKGNVLDAGQLLQGKVAGLSIGTPSGDPTSGSQILLRGNTTLLGANANPLVLIDGIPG
DLKTVAPEDIESVDVLKDGSAAAIYGTRGTNGVIIITTRRASGTFSNSVDYSGYVSTQTI
ARAPEMLTAADYRQQIADGVRDASWDQGANTDWLKEISQTPLTHVHNLTFRGGNSKTNYL
ANVNYRSLEGIMKKSDNRTFTGRIDINHSMLDDKLRINLGMLNASNKYTTTGDGFSFNGY
TYRQAIIRNPTSPLKDAAGNWYEQTGLFNYENPVSRLYESDGRNTSQNSRLNGSLTLLPV
EGLKLSALFSYTRYNEDRGYAETKRHISTLRDGRNGYASVGSTQSIDRLMELTAQYNADI
NRHKFTLLGGYSYQENEYNTNWMQNWDFPTDRFTYNNIGIGQALKEGLAPQYSEKRETNL
IGFFGRATYSYDDRYLLLASLRHEAASQLYGTRKPWGTFPAVSAGWRISNESFMKGQGLF
DDLKLRAGYGVTGTQPTNLFLGVAILNYGGYVYSNGVWIQTLGPSQNPNADLRWEEKHET
NAGIDFSMFKGRINGSVDYYIRRINGLLYDYQVPSPPNLYPSTRANVGKMENKGLEVLVN
FIPVRTKDFEWSSSLNFSTNTNKLVSLSNNLYKATNNYFTTGGTGEPIQTFTHIVNIGDN
IGDLYGFKVVDISDDGKWIYEGRDGKPVNYDDFQHAFEDKRVLGNGLPKYYGGWNNSFRY
KQFDLNITMRGAFDYQILNYQRMYYENTGLQQYNRLKSAYDKIYGKAVLSKDMPLEFNSQ
YVENGDFWKVDNITLGYNIRHLKSKYLHAARVYVSTLNTFVITGYKGIDPEVNRLGLAPG
NDERDKYPSVRTFTVGVNMSF
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccgctgttgccggcttgcccactcctgccggaatggccaagatcattacaggt
gttgtaactgatgaaaaaggagaaccgctgcctggcgtaagtattgttgtaaaatcatcg
cgcgccggcacaatgaccaatgagaaagggatcttttcactggatgccaggagtgagtct
gatacgctccttatcagctatattggctaccgtacacaggaggtagctgtgaaagggcgc
agccagctgaatgtacaactcgtactcagtgagaactccctggctgatgtagtagtgatc
gggtatggcagtctgcgaaaaggagaccttaccagcgctgttgcgactgtaaaatcagaa
agctttgtaaaaggaaatgtactggatgctggtcagctgttacagggtaaagtagccggt
ctttcaatcggtacacccagtggcgatcctaccagcggttcacagatcctgttacgtggt
aatacaacactgcttggtgcgaatgccaatccgctggtactgatagatggtatccccggc
gatcttaaaacagttgctcctgaggatatcgaatctgtagatgtactgaaagatggttct
gctgccgcgatttacggtacccgtggtacaaatggtgtgatcatcattactacccgcagg
gccagtggcacgttcagtaactcggtcgattacagtggatatgtaagtacacaaaccatc
gcccgtgcacctgaaatgctgactgcagctgattaccgtcagcagatcgctgatggcgtg
agagacgcttcctgggatcagggtgctaacaccgactggttaaaggaaatatcacagacg
ccgctgacgcatgtgcataacctgacattcagaggtggcaacagcaagacaaactacctg
gcgaatgtgaactatcgttcactggaaggtattatgaagaagtcagataaccggacattc
accggccgtatagatattaatcacagtatgctggatgataaattgcgtatcaacctcggt
atgctgaacgccagtaacaaatacactaccaccggcgatggtttcagctttaacggatat
acttacagacaggcgatcatccgtaaccctacttccccgctgaaagatgctgcaggtaac
tggtatgagcagaccggccttttcaactatgagaaccctgtttccaggttatatgagagt
gatggccgtaatacgtctcaaaattcccgtttaaatggctcactgacgctcttgcctgtc
gagggactgaagctgtctgcattgttctcatacacgcgttataatgaagacaggggatat
gctgagaccaagcgtcacatttccacgctcagagatggccgtaatggctacgcatctgta
ggtagtacacaatctattgaccgcctgatggaactgactgctcagtataatgcagatatc
aacagacacaaatttaccttacttggcggctacagctaccaggagaatgaatacaacacc
aactggatgcagaactgggacttcccaactgaccgttttacctataacaacattggtatc
ggacaggcattaaaagaaggactggctccgcagtatagtgaaaagagagaaacaaacctg
ataggcttctttggaagagcaacctatagctacgatgatcgttatctgttactcgccagc
ctcagacatgaagctgccagccagttgtacggtacacggaagccatggggtacattccct
gccgtatccgcaggatggcgtatcagcaatgaatcattcatgaaaggacagggactgttt
gatgacctgaaactgcgtgctggttacggcgttacaggtactcagcctactaatctcttc
ctgggtgtggctatcctgaactatggtggctatgtatattctaacggtgtatggatacag
acactcggcccttcacaaaacccgaatgccgacctgcgctgggaagagaaacatgaaacc
aatgccggtattgatttttccatgttcaaagggagaataaatggtagtgtggattattat
atccgccgtatcaatggcctgttgtacgactatcaggtacccagtccgccgaacctctac
ccttctacccgcgcaaatgttggtaaaatggaaaataaaggtctggaagtactggtcaac
tttattcctgtcagaacgaaagactttgaatggagcagcagtctgaacttctctacaaac
acaaacaaactggtcagcctttccaacaacctgtataaagctacgaacaactattttacc
actggtggcaccggagaacctatacagacgttcacacacattgtgaatatcggagacaat
attggtgacctctacggatttaaggtagtggatatctctgatgatggtaaatggatctat
gaaggacgtgatggtaagccggtcaactatgatgattttcagcatgctttcgaagacaag
cgtgtattgggcaatggcttgccgaaatattatggtggatggaacaacagcttccgttat
aaacagtttgatctgaacattaccatgcgcggtgcattcgattatcagatcctgaactac
caacgcatgtattacgagaataccggtctgcaacagtataaccgcctgaaatcagcttat
gataagatctatggcaaagccgtattaagtaaggatatgccacttgaatttaatagccag
tatgtggaaaacggtgatttctggaaggtagataatatcacgttgggctataacatccgc
catctgaaatcaaaatacctgcatgctgcgagagtgtacgtatcaacactgaacactttt
gtcatcacaggctataaaggaatagacccggaagtgaacagactgggactggcgcctggt
aatgatgagcgtgataaatatccgtctgtgagaacatttactgtaggtgtaaacatgagt
ttctga
DBGET
integrated database retrieval system
