Chitinophaga agri: GWR21_19175
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Entry
GWR21_19175 CDS
T06416
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
chih
Chitinophaga agri
Pathway
chih03030
DNA replication
chih03410
Base excision repair
chih03420
Nucleotide excision repair
chih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GWR21_19175 (polA)
03410 Base excision repair
GWR21_19175 (polA)
03420 Nucleotide excision repair
GWR21_19175 (polA)
03440 Homologous recombination
GWR21_19175 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chih03032
]
GWR21_19175 (polA)
03400 DNA repair and recombination proteins [BR:
chih03400
]
GWR21_19175 (polA)
Enzymes [BR:
chih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GWR21_19175 (polA)
DNA replication proteins [BR:
chih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GWR21_19175 (polA)
DNA repair and recombination proteins [BR:
chih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GWR21_19175 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GWR21_19175 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
CoV_NSP8
Motif
Other DBs
NCBI-ProteinID:
QHS61643
UniProt:
A0A6B9ZM16
LinkDB
All DBs
Position
4830365..4833187
Genome browser
AA seq
940 aa
AA seq
DB search
MQKKLFLLDAMALIYRAYYALIRNPRLTSTGRNTNAQFGFTSTLLDLINKEKPTHMAVAF
DTHAPTERHTTFVDYKANRMDAPEDILDSLDDIKRIITGFNIPVVELDGYEADDVIGTLA
WQAADAGYSVYMVTPDKDYGQLVRENVFIYKPPYMGNKEEILGPKEVCEKWQIADVHQVI
DILGLMGDAVDNIPGIPGVGEKTAMKLLAQYGSVEDVIANADKIGGKMAEKIKAGAESAI
LSKQLATIITDVPVTFHEEDFCIKDPNKEQLIEVFTELEFKTLGKRILGDSFVPAAAAEP
ASPRKAQLDLFGNEIQGAVPPASEEPQEVVQSIMIADRNITNTPHNYLLADTPEKRAELL
DLLLKQQEISFDTETTGTDANAVDLVGMSFSIKAGEGWYIPVPADRTLAQAIVDSFRPLF
DTTHILFIGQNIKYDMIVMKWYGVEFKGPVFDTMLAHYLIEPEGRRSMDLLSAQYLQYEP
VSIETLIGKKGKGQGNMRDVEIEKIKDYAVEDADITLQLKEKFAPLLPLKAVEKVFYEVE
NPLVKVLTDMEYEGIALDIQALSDYSRELETEIKRAEESVYSQAGVRFNLASPKQLGEVL
FEKLLLDPKAKKTRTGQYATGEDVLAKLSNKHQIVEDILVFRELSKLKSTYVDALPLMLN
KKTNRVHTSYNQAVAVTGRLSSNNPNLQNIPIRTDRGREVRKAFVARNEDFVLMSADYSQ
IELRIIAAISEDVHMIDAFRQGLDIHAATAAKVYGVDLADVTSEMRRNAKSVNFGIIYGV
SAFGLSENLGIARGEAKTLIDNYFAQYPSIKEYMDKQIQSAQQNGYVETLLGRKRWLKDI
NSSNAVVRGYAERNAINMPIQGTAADMIKLAMIAIHKTLRKENLRSRMILQVHDELVFDV
HKDEVELIKPLIEEGMRNALPLSVPVDVEIGIGRNWLQAH
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaaattgttcttactggatgcaatggcacttatctatcgtgcctattatgca
ttgatcagaaatccacgccttaccagcaccggcagaaatacgaacgcccagttcggtttt
acttccaccttgctggaccttattaataaggaaaagccaactcacatggcagtggcattt
gatacgcatgctcctacggaaagacataccaccttcgttgactataaggcaaacaggatg
gatgcccctgaagatatcctggactcactggatgatatcaaacgcatcatcaccggtttc
aatatacctgttgttgaactggatggctacgaagctgatgatgtgatcggcacactggca
tggcaggctgcagatgccggttatagtgtatacatggtaacacctgataaggactatggt
cagctcgtaagagaaaatgtatttatctacaaacctccttacatgggtaataaagaagaa
attctcggcccgaaggaagtgtgtgaaaaatggcagatcgcggatgtacaccaggtaata
gatatcctgggactgatgggtgacgcggtcgataatattcctggcatcccgggtgtagga
gagaaaacggcgatgaagctgcttgcccagtatggctctgtggaagatgtgatcgccaat
gcagataagataggcggcaagatggccgagaagatcaaagccggcgcagaaagtgcgatc
ctatccaaacaactggccaccatcataacagatgtaccagtaaccttccatgaagaagac
ttctgcatcaaagaccctaacaaggaacagctgatagaagtattcacagaactggaattt
aaaaccctggggaaacgtatcctgggcgatagcttcgttcctgctgcggcagcagaacct
gcctccccgcgcaaagcgcagcttgacctcttcggtaatgaaatacagggcgctgtaccg
ccggcatctgaagagccacaggaagtagtgcagagcatcatgatcgccgacaggaatatc
acgaatacgccacataattatctgctcgcggatacacccgagaaaagagccgagctactg
gacctgctgctgaaacagcaggaaatttctttcgataccgaaacaaccggtactgatgcg
aatgcggttgacctggtggggatgagcttttctatcaaggcgggtgaaggatggtatatc
ccggtaccggcggacaggacgctggcacaggcgatcgttgacagcttccgcccactcttt
gataccacccatatcttattcattggtcagaatatcaaatacgatatgatcgtgatgaag
tggtacggtgtggaatttaaaggccccgtgttcgacaccatgctcgcacactaccttatt
gagccggaaggccgccgtagtatggacctgctcagcgcccagtaccttcagtacgaaccc
gtgtctattgagacgctgatcggaaagaaaggaaaaggtcagggtaatatgcgggatgtg
gaaattgaaaagatcaaagattacgcagtagaggatgccgacattactctccagctgaaa
gaaaagtttgcaccactcctgcctttgaaagcagtggaaaaagtattctacgaagtggaa
aacccactggtgaaggtactgactgatatggagtatgaaggtattgccctggatatccag
gctttaagtgactactcccgcgaactggaaactgagatcaaacgcgcagaagaaagtgta
tatagccaggcaggcgtccgtttcaacctcgcatctcccaaacaactgggagaggtgctg
ttcgaaaaactgctgctcgacccaaaagccaagaagacaagaacaggacaatacgccact
ggtgaagacgtactggccaaattgtccaataagcaccagatcgtggaagacatcctggta
ttccgcgaactgagcaaactgaaatctacctatgtagatgccttgccgctgatgctgaat
aaaaagacgaaccgtgtacatacctcttacaatcaggcggtagccgttaccggtcgtctc
agctctaacaatccgaacctgcagaacattcctatccgtactgacaggggccgtgaggtg
cgtaaggcattcgtagccaggaatgaagacttcgttctaatgtctgccgactattcacag
atagagttacgtatcatcgccgctatcagtgaagatgtacatatgattgatgctttccgt
caggggctcgatattcatgctgccactgcggcgaaggtatatggggtagacctggcagat
gtgacatctgaaatgcgccgtaatgccaagagtgtgaacttcggtatcatttacggtgtg
agtgcatttggcctgtcagaaaatctgggtatcgccaggggagaagcaaagacgctgatc
gataactattttgcacagtatccgtctattaaggagtacatggacaagcagatccagtct
gcacagcagaatggttatgtagaaactctcctgggacgtaaacgctggctgaaagacatc
aactcctccaatgcagtggtgagaggctacgcagaacgaaatgccatcaacatgccgata
caaggtaccgctgccgacatgatcaaactggccatgatcgctattcacaaaacactccgg
aaagaaaacctccgctcccgcatgatcctgcaggtacacgatgagttggtgtttgacgtg
cataaagatgaagtagagctgatcaagccattgatagaagaaggcatgcgtaatgcactc
cctctttccgttcctgtggatgttgaaataggcattggccgtaactggttacaggcccat
tag
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