Chitinophaga agri: GWR21_23450
Help
Entry
GWR21_23450 CDS
T06416
Name
(GenBank) collagen-like protein
Organism
chih
Chitinophaga agri
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-ProteinID:
QHS62434
UniProt:
A0A6B9ZLZ6
LinkDB
All DBs
Position
complement(5852472..5855687)
Genome browser
AA seq
1071 aa
AA seq
DB search
MKKLYILIILLVTTCAGTFAQNGLAGTNYQAVVRNTNGTVIANKDISVRISILGGSAAGP
VQYEETHEVRTSALGLFNLQIGKGNANTGTFAGVPWANANQYVKVEVNTGSGFVSLGTTE
LLSVPYALYAANGNAGPQGPAGPQGPAGPAGAQGPQGAAGPAGATGPAGAKGDAGVPGPQ
GVAGPVGPVGPAGAKGDPGAPGPQGAVGPVGPMGPVGPAGAQGDPGPAGPVGPVGPAGPV
GPQGAQGDPGVAGPAGPVGPVGPAGAVGPQGVQGDPGVAGPAGPVGPIGPIGPVGPAGPQ
GPVGPAGDINGVAAGGDLGGTYPNPNVVKLQNTGVSNTAPLAGQILRFDGTNWAPSAAGG
GFTLPFTTVENNAATLFSITNDGDGTSVEGINNTTTSNIAAVRGIVNSTAPGGFSSAVRG
INNGSGGLGIGVWGSQAGSGWGVYGSTPNGLGVYGNASANGYGVYANSNTGTGLNATSNN
GVAANIAINNNSNNNNVLTVNTVGQGTVVNVSTTGNGTGVLSSTVAGFGVHGITSQQTSA
GIVGDNNGAGEAIVGRTTSDIAGAVVGRNDGGGYGVRGFIATSTSNTGVGVYGQVGINNS
TGMAGKFENFNQNNTEANILEVVSNSNGNIPDNTLGNASSFLLDNNNSVGAAVRAEVNTI
FGNFGAAGVFGISSGTGGRAGLFYASNPSGNGASLIALTDGNGNAITANAGKNGNGVETN
IDGAGTALYAWVPTFSEGRAGRFEIFNEDNENPVITVKTVGNGTAGNFIVDRTTGTSPAV
KGEVNSQFANFGTAGIFGQSSGTGGYAGLFYASNPAGNGPAVLALADGNGNGITANAGGS
GDGIEASCDGTGNAVSGFVPNFGTGKAGRFANFNSANAQPVVHITTNGTGNGMLINHQGP
SGNVAVFQSGSSNVARINKAGRGFFNGGTQSSGADVAEAFDVTGNVSHYAPGDVLVIAEN
ADRTVELSSKPYSTLVAGVYATKPGVLLTEEDVDSDLADKVPMGVIGVIPTKVCGEGGAI
RRGDLLVTSSKAGHAMKADLDKVKPGQVIGKALETFDGNGTGTIRVLVNVR
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattatatatcctcatcatactgctggtcactacctgtgcaggtaccttcgct
cagaacgggctggcaggtaccaattaccaggcggttgtccgcaacacaaatggcactgtc
atcgccaataaagacatctccgttcgtatctccattctcggtggctctgctgctggcccg
gtacaatacgaagagacccatgaagtaaggaccagcgctctcggcctgttcaatttacag
atcggtaaggggaacgccaataccggcacatttgcaggtgttccctgggcgaatgctaat
cagtatgtaaaagtagaagtcaatacaggcagcggcttcgtctctctcggtacgaccgaa
ttactcagtgtaccatatgctttatatgctgcgaatggtaacgcaggaccacagggtccc
gctggtccgcaaggtccggccggccctgcaggtgcacaaggcccacagggcgctgctggc
cctgctggagctacaggacctgcgggtgctaaaggagatgcaggtgtaccaggcccacag
ggtgtggcaggtcccgtaggaccagttggccctgctggtgcaaagggtgatccaggtgca
ccaggcccacagggtgctgttggtccggtaggtccaatgggacccgtaggccctgcaggc
gcacaaggcgatcctggtcctgctggtcctgttgggccggtgggtcccgctgggcccgta
gggccacagggcgcacagggtgatcccggtgtagcaggtcccgctggtcctgttgggccg
gtgggtcccgctggtgctgtgggcccacaaggtgtacagggtgaccccggtgtagcaggc
cccgctgggcccgtagggccaatcggaccaattggcccggtaggacctgcaggaccgcaa
ggaccggtaggaccagctggcgacatcaatggtgtggcagcaggcggagacctgggtggt
acatatcctaatcccaacgtagtgaagctgcagaacaccggcgtttccaatacggcgcca
ctggcaggtcagatactccggtttgatggtaccaactgggccccatccgcagctggtggc
gggtttacattgcctttcactactgtagaaaacaatgctgctacactgttttccatcacc
aatgacggcgacggtacttccgtagaaggtatcaataacaccactacctccaacattgct
gccgtacgtggtattgtaaacagtactgcacctggtggattctcaagtgccgtacgcggt
atcaacaatggttcaggtggattaggtatcggcgtttggggttcacaggccggctccgga
tggggggtgtatggctctactccgaatggtctgggcgtatatggtaacgccagtgccaat
ggctacggtgtatacgccaatagtaacactggtacgggactgaatgccacctctaacaac
ggtgttgccgccaacatcgctatcaataataattcaaataataacaatgtattgaccgtc
aatactgtaggacagggtactgtggtcaatgtcagcacaaccgggaatggtactggtgtt
ttgagtagtacggttgctggctttggtgtacatggtattacaagtcagcagacttctgca
ggcatagttggtgataacaatggcgctggtgaagcgatcgttggtcgtaccacttccgac
attgctggtgctgtggttggccgtaatgatggtggcggttatggtgtgagaggttttatt
gctaccagtacctccaatacaggtgtaggcgtgtatggacaggtgggtattaataacagc
acgggtatggctggtaaatttgaaaacttcaaccagaacaatacggaagcgaatatcctg
gaggttgtcagcaacagtaatggcaacattcctgataatacactgggtaatgcctcctcc
ttcctgctggataacaataacagcgtaggtgctgctgtgagagcagaagtaaataccatt
tttggcaacttcggtgcagctggtgtattcggtatctcttccggtacaggaggtcgtgca
ggtctgttctatgcgtcaaacccttccggtaacggtgcttccctgattgccctgaccgat
ggtaacggtaacgcgatcactgccaatgcaggtaaaaatggtaatggcgtagaaacgaat
attgatggtgcaggtaccgcattatatgcctgggtacccactttcagtgagggtcgtgca
ggccggtttgagatttttaatgaggataatgaaaatccggttattacagtgaaaacagta
ggtaacggtactgcaggtaatttcattgtagacaggacgacaggtacatctcccgcagta
aaaggcgaagtaaactcccagttcgccaacttcggtaccgctggtattttcggacaatca
tccggtactggtggttatgcgggcctgttctacgcatccaatcctgctggcaatggcccg
gctgttctcgcactggccgatggtaacggtaacggtatcactgcgaacgccggtggtagt
ggcgatggtatagaagccagttgtgacggaactggtaatgcggtttccggctttgttccc
aactttggtacaggtaaagcgggacgcttcgctaattttaacagtgctaacgcccaaccg
gtggtacacattaccaccaatggtactggcaacggcatgttgatcaaccatcagggccct
tccggcaatgtggctgttttccagagtggcagctccaacgtagcccgcatcaataaagct
ggtcgcggattcttcaacggcggtacacagagcagcggtgctgacgtggcggaagctttt
gatgtaacagggaatgtgagtcattacgccccgggggatgtactggtgatcgctgagaat
gccgacagaactgttgagctgtcttccaaaccttactctaccctggtcgcaggcgtatat
gcgaccaaaccaggtgtactgttaacggaagaagatgtcgacagtgatctggcagataaa
gtgccaatgggcgttatcggggtgatccctacaaaggtatgtggagaaggcggcgctatt
cgaagaggagatctgctggtaacgtccagtaaggctggtcatgccatgaaagctgacctg
gacaaggtgaaacctggccaggttattggtaaagcattagagacttttgatggaaatggt
accggtacgatcagagtactggtaaatgtgagataa
DBGET
integrated database retrieval system
