Chitinophaga agri: GWR21_23620
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Entry
GWR21_23620 CDS
T06416
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
chih
Chitinophaga agri
Pathway
chih03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GWR21_23620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chih03021
]
GWR21_23620
03400 DNA repair and recombination proteins [BR:
chih03400
]
GWR21_23620
Enzymes [BR:
chih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GWR21_23620
Transcription machinery [BR:
chih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GWR21_23620
DNA repair and recombination proteins [BR:
chih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GWR21_23620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
ProRS-C_2
RAD51D_N
GIPC1_GH1
Motif
Other DBs
NCBI-ProteinID:
QHS62466
UniProt:
A0A6B9ZKF8
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All DBs
Position
5878781..5879776
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AA seq
331 aa
AA seq
DB search
MAILNFQKPDKIVLQKSTDFEAQFEFRPLEPGYGVTVGNALRRVLLSSLEGYAIVGIKIE
GADHEFATLKGITEDVTEIILNLKQVRFKRIVENEVSNEKIQISIKGKTEFRADMIEKAT
SAFQIMNPELLICTLDPSAKLDIELTIGKGRGYVPAEENKPKDAVFGYIAIDSIFTPIKN
VKYSIENTRVEQKTDYEKLIMEVITDGTIHPEEAVKQASRILIQHLMIITDENISFDTKD
TEKEDVVDEQTLQLRKILKTPLEDLDLSVRAFNCLKAAKINSLSELVQYEQEELMKFRNF
GQKSLSEIEQVLNERGLHFGMDLSKLKLDEE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaattctgaatttccaaaagcctgataaaatcgttttgcagaagtcaactgacttt
gaagctcaattcgaattccggccgttagaaccgggttacggtgtgactgtgggtaacgcg
ctgcgtcgtgtgctgctgtcatctctggaggggtatgccattgtgggaataaagattgaa
ggtgcagatcacgagtttgctactttaaaaggaatcactgaagacgttactgaaatcatc
ctgaatctgaaacaggtacgtttcaaacgcatcgttgagaacgaagttagcaacgagaaa
attcagatttctattaaaggtaaaactgagttccgtgctgacatgatcgaaaaagcaacc
agtgctttccagatcatgaatcctgaattgcttatctgtacgctggatccatctgcaaag
ctggatatcgaactgactatcggtaaaggccgtggttatgtgccagctgaagagaataaa
ccaaaagatgccgttttcggttacatcgctatcgactctatctttacgccaatcaaaaac
gtaaaatatagcatcgagaacacccgtgtggaacaaaagactgactatgagaagctgatc
atggaagtgatcaccgatggtaccatccacccggaagaagctgtaaaacaagcatcccgt
atattgatccagcacttaatgatcatcactgatgaaaacatcagctttgatactaaggac
actgaaaaagaagatgttgttgacgaacagacactgcagttgcgtaagatcctgaagacg
ccgctggaggatctggatctgagtgtacgtgcattcaactgcctgaaagctgctaagatc
aattccctgagcgaactggtgcagtacgaacaggaagaactgatgaagttcagaaacttt
ggtcagaaatctctcagtgaaattgagcaggtgctgaacgaaagaggtctgcatttcggt
atggacttgtccaagctgaaattagacgaagaataa
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