Chitinophaga agri: GWR21_24185
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Entry
GWR21_24185 CDS
T06416
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
chih
Chitinophaga agri
Pathway
chih00300
Lysine biosynthesis
chih00470
D-Amino acid metabolism
chih01100
Metabolic pathways
chih01110
Biosynthesis of secondary metabolites
chih01120
Microbial metabolism in diverse environments
chih01230
Biosynthesis of amino acids
Module
chih_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
chih_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GWR21_24185 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GWR21_24185 (lysA)
Enzymes [BR:
chih01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GWR21_24185 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
HTH_PafC
Motif
Other DBs
NCBI-ProteinID:
QHS62568
UniProt:
A0A6B9ZJL9
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Position
6016918..6018225
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AA seq
435 aa
AA seq
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MDLFQYKNGVLYCEELPVDSLPEKGLPTPFYLYSVNTLRQHYKKIYGAFAKLDPTICFSV
KSCNNVHLLNELAAMGSGMDIVSGGELFVVKQSNADLSKVVFAGVGKSDEEITDAIISEV
GYINIESEQELARVQELAGHLKREVSVLIRVLPDITDQKTNEKTRTGYKGAKFGIDYAAV
EALIEENADHPFVKIRGLHCHIGSPISSYTFYQESIQKMVALTASLKRKNIILKVLNIGG
GFPANYVDNDNFSWESFAEPIIALLEPYVRNEGFKIILEPGRSISANTAILVTKVLYIKQ
SGDKHIAILDAGMTELIRPAMYNAFHFIWPVKPEPQHVLANRNYPVEQEGLTNYDVVGPI
CESSDYLAKERPLPPLQQGDYVAVFTTGAYGMVMSSNYNLHVRPAEIMVDKDKAFVIRER
ETQQDLVRKMIRHEL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggatctgtttcaatataagaatggcgtactgtattgtgaggagctgccggtagatagc
ctgccggagaaagggctgcctactcctttttacctgtactcagtgaataccctcagacag
cattataagaagatttatggcgcctttgcaaagctggaccctacaatctgtttttcagtg
aagtcctgtaacaacgtgcacctgctcaatgaactggctgccatggggtctggtatggac
attgtgagcggaggagagttgtttgttgtgaagcagagcaatgcggacctgtcaaaggta
gtatttgccggggtcggtaagtcagatgaggagatcacagatgctatcattagtgaagtt
ggctatatcaacatcgaatcggagcaggaactggcacgtgtacaggagttggccggccac
ctcaagagagaggttagtgtgctgatccgtgtgctgcctgatattactgatcagaagacc
aatgaaaagacccgtacgggttataagggagcgaaattcgggattgattatgcagctgtg
gaagcgctcatagaagaaaatgcggatcatccctttgtgaagatcagaggattgcattgc
catatcggttcgccgatatcttcctatactttttatcaggaaagcattcagaagatggtt
gcgctgacagcgtcgctgaaacgtaagaacatcatcctgaaagtactgaatatcggtggc
ggctttcctgctaattatgttgataatgacaatttttcctgggagagctttgcggaacct
atcatagcgttactcgaaccttatgtgaggaatgaaggatttaagatcatactggaaccc
ggaaggtctatttctgcgaatacggccatccttgtgaccaaagtattgtacatcaaacag
tccggcgacaagcatattgctatcctggatgctggcatgacagaactcatacgtcctgcg
atgtataacgcatttcactttatctggccggtaaaaccggaaccacagcatgtgctcgca
aacaggaattatccggtagagcaggagggattgaccaattatgacgttgtcggacctatc
tgtgaatcttcagattacctggcgaaagaacgtcctttaccgccattgcagcagggggat
tatgtggctgtatttacaacaggcgcgtatggcatggtcatgtcaagcaattataacctc
catgtaagaccggcagagatcatggtagataaagacaaggcgtttgtcatcagagagcgt
gaaacacagcaggacctggtgagaaaaatgatcagacacgaattgtaa
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