Chitinophaga agri: GWR21_24430
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Entry
GWR21_24430 CDS
T06416
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
chih
Chitinophaga agri
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chih02000
]
GWR21_24430
Transporters [BR:
chih02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GWR21_24430
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Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
LPAM_1
TPR_19
SusD-like_2
TPR_6
Motif
Other DBs
NCBI-ProteinID:
QHS62612
UniProt:
A0A6B9ZJI7
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Position
6085364..6087127
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AA seq
587 aa
AA seq
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MRKIFSYILLTASLTACSSILDKTDLTGIDERTWDHESTATLYLNRIYDLAMPTWPNLSG
AATLPTAIHDVSDDYNGGDQKIWYGTLSVDNVNDFFGGNASNNVWAYIRKTNILLTEIEK
GTLPQDVKTRLKAQAYFLRGWMYFQLVKLYGGVPYISHPQDWVTENLFVTRNKTSECIDS
IARDFDMATSLPATWGSSDRGRITRGAALGVKGRMLLYWASPQFNPDNDQQRWERAYKAN
KAAYDTLVLDGYGLFSNFANIWFEEATGNKEVIMLRSFDGATKASTFDDAARPNSESNGG
GGAYQPTWDFVKAFPTIDGLPITDPNSGYDPVYYWKNRDPRFDATIAYNGAIWPLSNKSG
RKQWIYAGVTDDKSKPNTTGFYCRKNVNPSIIKDNTKLGKTDWIEMRFAEVMLNLAECAN
ATGRTQEAYDMLTAIRKRAGIRPGEGSLYGLKPGMSKEEMFEAIMNERRIELAFEGKRYD
DLRRNKLFDRLNGKKRTILKIAVKAPYTVADLEKTDATGIPLRDKLDINGADYTTYFTVT
EDVLDTQKPINYPSTYYFYAIPTSNITRNPSLVQTIGWGNGTFNPLD
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaaatattcagctatatattacttaccgccagtcttaccgcctgttcaagtatt
ctcgacaagacggacctgacgggtatcgacgaacgtacctgggatcatgagtcaactgcg
acactttatctcaacaggatatatgacctggccatgcctacctggcccaatctctccgga
gcagccaccctgccaactgctattcatgatgtatctgatgactataatggcggtgatcag
aagatctggtatggtacgctttctgtggataatgtcaatgacttttttggaggtaacgct
tccaacaacgtatgggcgtacatccgcaaaaccaatatcctgctgactgaaatagaaaaa
ggtacattaccgcaggatgttaaaacccggctaaaagcacaggcttactttctgagaggc
tggatgtatttccagctggtaaaactgtacggtggggtgccttatatcagtcatccgcag
gactgggtaaccgagaacctgttcgttaccaggaataaaacgtccgaatgtatcgattct
attgcccgtgattttgatatggctacttcgttacctgctacatggggcagttcagacaga
ggacgtatcacccgtggggctgcattgggtgtaaaaggccgtatgctgttatattgggca
agcccgcagtttaaccctgacaatgatcagcaacgctgggaaagggcttataaagctaat
aaagcggcttatgatacactggtgcttgatgggtatggactgttctccaactttgccaat
atctggtttgaagaggctacaggcaataaagaagtgatcatgctgcgttcttttgatggt
gcaacaaaagccagcacctttgatgacgctgcccgtccgaattcagagtctaatggtggt
ggcggtgcttaccagcctacctgggatttcgtgaaagctttccctactattgatggcctg
ccgatcaccgatcctaattcaggatacgaccctgtatattactggaagaaccgtgatccg
cgttttgatgctactatcgcctataatggtgctatctggccacttagtaataaatcgggc
cgtaaacaatggatatatgccggagtgaccgacgataagagtaagcctaataccaccgga
ttctactgtcgtaaaaatgtgaacccatccattattaaggataataccaaacttggtaaa
acagactggatcgaaatgcgttttgcagaagtgatgctgaacctggcagagtgtgccaat
gctacgggtcgtacccaggaagcatatgatatgctgaccgctatccgtaagagggcaggt
attcgcccgggcgaaggaagcctatacggcctgaagccaggcatgtccaaagaggaaatg
tttgaggcgatcatgaatgaacgtcgtatagaactggcatttgaagggaaacgttatgac
gacctgcgccgtaataagctgtttgacaggctgaatggaaagaaacgcactattctgaaa
atcgctgttaaagcgccttatacagtggccgatctggaaaagacggacgcgacgggcata
ccattacgtgataaactcgatattaacggagcagattatactacgtattttacggtgacg
gaagatgtgttggatacacagaagccaatcaactatccgtccacttattatttttacgcc
attcctaccagtaatatcacgagaaacccgagtctggtacagacaataggctggggaaat
ggcactttcaatccgttagattaa
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