Chitinophaga agri: GWR21_25180
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Entry
GWR21_25180 CDS
T06416
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chih
Chitinophaga agri
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chih03032
]
GWR21_25180 (topA)
03400 DNA repair and recombination proteins [BR:
chih03400
]
GWR21_25180 (topA)
Enzymes [BR:
chih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GWR21_25180 (topA)
DNA replication proteins [BR:
chih03032
]
Prokaryotic type
DNA Topoisomerases
GWR21_25180 (topA)
DNA repair and recombination proteins [BR:
chih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GWR21_25180 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Glucosaminidase
FGase
Motif
Other DBs
NCBI-ProteinID:
QHS62752
UniProt:
A0A6B9ZK49
LinkDB
All DBs
Position
complement(6277598..6279952)
Genome browser
AA seq
784 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKILGKDFEVKSCFGHIRDLEKDDMGIDIANNFKPKYTIPEDK
EKIVKELKKLAKDTDEVWLATDEDREGEAISWHLCEVLGLDPDVTKRIVFHEITKPAIER
AVQQPRLLDMNLVNAQQARRILDRIVGFELSPVLWRKMSMRNSLSAGRVQSVAVRLIVER
EREINTFNAVSAFKVEAFFTAKDLQGKNITFKAEGPTRFKTAEDAEKFLQQCVGAAYTVK
DIQVKPGKKSPAAPFTTSTLQQEASRKLGYSVSKTMLLAQKLYESGNITYMRTDSVNLSD
TALADIQNAINTNYGQKYHQYRKFKNKNESAQEAHEAIRPTYMENATVDDSDTKKLYELI
WKRTIASQMSDAELEKTIAKIDISTNHDELTASGEVLKFDGFLKVYMEGKDDEDVSDEED
SDGSLPPLAVKQALDLKEMKATERFTRPAPRYTEASLVKKLEELGIGRPSTYAPTITTVQ
KRGYVEKRDKEGIKRDFRILSLKADKITKVTESENTGAEKSKLFPTDLGMIVTDFLNQYF
SSVMDYGFTAKIEGEFDEVAHGKKIWNKMLNDFYTPFHKDVENTLEKAERVKGERQLGID
AESGKPIVARMGRYGPMIQIGKAEDEEKPKFAKMKSTQSIETITLEEAMELFRLPRNLGQ
FEDQDVLVNIGRFGPYAAHDKKFYSLKKEMDPYTVELDEIAPLIVEKRTAKDERTIKVFE
KEKIQILKGPYGPYIKQGLRNYKIPKEKIDAAADITLEEAKAIIEDVKANPPKKKAPPKK
KKAE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatctagtaatagttgagtctccggcgaaagccaagaccattgaaaagata
ctgggcaaagacttcgaggtgaaatcctgctttggtcacatccgtgatctggaaaaggat
gatatgggtatcgacatcgccaacaactttaaaccgaagtataccatacctgaggataaa
gagaagattgttaaggaattaaagaaactcgccaaagacactgacgaagtttggttagca
acggatgaggaccgtgaaggggaagccatatcctggcatttgtgtgaggtactgggtctg
gacccggatgttaccaaacgtatcgtattccacgaaattacgaagcccgccattgaaaga
gccgtacaacagccccgcctattagatatgaacctggtcaacgcccagcaggccagacgt
attttagacagaatagttggttttgaattatctccggtgctctggcgtaaaatgagcatg
cgtaattcattatccgcaggccgtgtgcaatctgttgctgtgagactgatcgtagaacgc
gaacgtgagatcaatacatttaatgccgttagtgcttttaaggtagaagccttctttact
gctaaagatcttcagggcaaaaatattacttttaaggctgaaggaccaacccgtttcaag
acggcggaagatgccgaaaagttcctgcaacagtgtgttggcgcggcttatacagtgaaa
gatattcaggtaaaaccaggtaaaaaatcgcctgccgctccttttacaacatctacactc
cagcaggaggccagccgtaaactgggatacagcgtttccaaaacaatgctgctcgcccag
aaactctacgaaagtggtaacatcacctatatgcgtactgactctgtgaacctgtcagat
acggccctcgcagatattcagaacgctatcaatacgaactacggccagaaatatcatcag
taccgtaagtttaaaaataagaacgaatcagcacaggaagcccacgaagcgatccgtcct
acctatatggaaaacgccactgttgatgacagtgacaccaaaaaactgtatgaactgatc
tggaaacgtacgatcgccagccagatgagcgacgcagaactggaaaagaccatcgctaag
atcgatatctccaccaaccacgacgaactgactgccagtggtgaagtactgaaattcgat
ggattcctgaaggtatatatggaaggtaaagatgatgaagatgtaagcgatgaagaagat
tcagatggttctttacccccacttgctgtaaaacaggcacttgacctgaaggaaatgaag
gctacagaacgctttacccgccctgctccccgttatacggaagcaagccttgtaaagaag
ctggaagaactgggtatcggtcgcccttctacctacgcacctaccattaccaccgtacaa
aaacgtggatacgtagaaaaacgcgacaaagaaggtataaagagagacttccggatactg
agcctgaaagccgataagatcacgaaagtaaccgaaagtgaaaataccggtgcggaaaag
tccaaactgtttccaacagacctgggcatgatcgttactgacttcctgaaccagtacttc
agctccgtaatggactatggcttcactgccaagatcgaaggtgagtttgatgaggtagcc
catggtaagaagatctggaataaaatgctgaacgacttctatacgcctttccataaagat
gtggaaaacacactggaaaaagcggaaagagtgaaaggtgaacgccagctcggtatcgat
gccgaaagtggtaagccaatcgtagcacgtatgggacgctatggccctatgatccagatc
ggtaaggcggaagatgaagagaagccgaagttcgcaaaaatgaagtccactcaaagtata
gaaaccattactttagaggaagcaatggagcttttcagactaccgcgtaacctcggacag
tttgaagatcaggatgtactggtgaacattggtcgattcggtccgtacgccgctcacgat
aagaagttctattccctgaaaaaggaaatggatccttatacagtggaactggatgaaata
gcgcctctgatcgtggaaaagagaacggcaaaagacgaacgtaccatcaaagtattcgaa
aaagaaaagatccagatactcaaaggcccatacggaccttatattaaacagggactgaga
aattataaaataccgaaagaaaagattgacgccgccgcggacataacgctggaagaagcc
aaagctatcatcgaagatgtaaaggccaaccctccaaagaaaaaagcgcccccgaaaaag
aagaaggcggaataa
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