KEGG   Chitinophaga agri: GWR21_26960
Entry
GWR21_26960       CDS       T06416                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
chih  Chitinophaga agri
Pathway
chih03030  DNA replication
chih03430  Mismatch repair
chih03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:chih00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GWR21_26960
   03430 Mismatch repair
    GWR21_26960
   03440 Homologous recombination
    GWR21_26960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:chih03032]
    GWR21_26960
   03400 DNA repair and recombination proteins [BR:chih03400]
    GWR21_26960
Enzymes [BR:chih01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GWR21_26960
DNA replication proteins [BR:chih03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GWR21_26960
DNA repair and recombination proteins [BR:chih03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GWR21_26960
SSDB
Motif
Pfam: RNase_T ExoX-like_C Rv2179c-like RNase_H_2 QSregVF_b TcaA_3rd_4th Hairy_orange PUA_2 T4_Spackle
Other DBs
NCBI-ProteinID: QHS63094
UniProt: A0A6B9ZNX5
LinkDB
Position
complement(6748471..6749244)
AA seq 257 aa
MPSLQLKRPLAVIDLETTGTNVATDRIIEIAIVKVFPDKTVQSKVKRINPGMPIPPSSTA
IHGISDDDVKDAPTFKQCANELRQYMDNCDLAGYNSNRFDIPLLVEEFLRTGLEFDVKDR
KFIDVQKIFHLMEKRTLSAAYKFYCDKDLVNAHSAEADALATYEILEAQLSRYEQLQAEV
TPLAEFTKEDDYVDFARRMVMQNGVEMFNFGKYKGRAVRDVLKIEPQYYDWMMKADFPLN
TKQKLTEIYHSMMLKKI
NT seq 774 nt   +upstreamnt  +downstreamnt
atgccctctttgcaacttaaaaggccactggccgtaattgatctggagacgaccggtacc
aatgtggctacggaccgtattatcgaaattgctattgttaaggtgttccctgataagact
gtacagtccaaggtgaaaagaatcaaccctggcatgcctattcctccttcctctactgct
attcatggtatcagcgatgacgatgtgaaggatgcaccgactttcaaacaatgtgcgaat
gaactgcgtcagtacatggacaactgtgacctggccggttataattccaaccgttttgat
atacccctgctggtagaagagttcctgcgtacaggactggagtttgatgtaaaggaccgt
aaattcattgacgtacagaaaatattccacctgatggaaaaacgtacactcagtgcagct
tacaagttctattgcgataaagacctcgtgaacgcacacagcgcagaagcagatgcactc
gctacctacgagatcctggaagcgcagctgagccgttatgagcagctgcaggcggaagtg
acaccactggcagaatttaccaaagaagatgattacgtggactttgcgagaagaatggtc
atgcagaatggggtggaaatgttcaattttggtaaatacaaaggccgtgcggtaagagac
gtgctgaaaattgagcctcaatattatgactggatgatgaaagctgattttccgctgaat
acgaagcagaaactcacagagatttatcacagtatgatgttaaaaaagatttaa

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