Chitinophaga agri: GWR21_28130
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Entry
GWR21_28130 CDS
T06416
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
chih
Chitinophaga agri
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chih02000
]
GWR21_28130
Transporters [BR:
chih02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GWR21_28130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
QHS63315
UniProt:
A0A6B9ZQ00
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All DBs
Position
7037912..7039834
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AA seq
640 aa
AA seq
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MNSIKTNRIFIVILMVIMIITGGCSKFLEPEAVSSFDTEYIFDNVQNARKALLGAYMSFS
GDYGYGIRISGYWPYDADEIQKGTNPNTNDEGQLLAKYLGIPSNLQITNPFNQMYQGIER
ANLCIYNIPKMQQYVNGSPQEQAQLKRMHGEALILRAQYYYEICRNFGDVPAQWQPSQYE
PDLYKPRTSRDTIYDHLLKDLLEAQHLMPWRMEVMGIGDPVDQRFTKGTAKALRAKIALT
RGGYSLSVSQQTMVRPADYLTYYKIARDECAELIANPAQHTLMASYKSLFKDYLLAHNLN
DPAGEFIMVASMAFGTNSDSKLGIQTGTRVNGVGGGNLSILPTYFYMFDSTDVRRDITCV
PYEITFDTIKTGHAINAINDGKFRKEWVTNPGYVFSAGNSATSSRPAINNSLQNMQLSWP
LIRFADVLLWFAEADNELNNGPTAAAIAAVSQVNKRGHGGGYTETPPVIPTDKAGFFKFL
VKERLLEFGGEGIRKYDLLRWNLLATAIQETRARLQAWANATDALHPAFPLYSYMEDGPA
YARDPAQFPSYLYYMKTPPRSNIDDFNPFLYSFYKPGPVESAPAGLVRVAWWLGGTTVPA
AQTFTNAFASGFTPNKSELMPLPQTQRDVNPNLSPQNPGY
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcataaagacgaaccggatttttatcgttatactgatggtgatcatgattatc
actggaggttgcagcaaattcctggaaccggaagcggtatcctcattcgacacggagtac
atctttgataatgtacagaatgcccggaaggccttgctgggcgcatatatgtctttctcc
ggcgactatggatatggtattcgtatcagcggttactggccgtatgatgctgatgagata
cagaaaggcacgaatccgaatactaatgacgaagggcagttgctggcaaagtacctgggt
attccttccaacctgcagatcacgaatccgtttaaccagatgtaccagggtattgaacgt
gcgaacctgtgtatttataatataccgaagatgcagcagtacgttaatggttctccacag
gaacaggcgcagctgaaaaggatgcatggagaagcgctgatcctgcgtgcgcagtactat
tacgaaatatgccggaacttcggtgatgtacccgcccaatggcagccatctcaatatgag
ccggatctgtataaaccacgtaccagcagggatacgatctatgatcatctgttgaaagac
ctgctggaggcacagcacctgatgccatggcgtatggaagtgatgggtatcggcgacccg
gtcgaccagcgttttaccaaaggaactgccaaggccttacgtgcgaagatcgccttgaca
agaggtggatattcactgtctgtatctcagcagacgatggtgcggccggcggattatctt
acatattataagatagcccgggatgaatgtgctgaactgatcgcaaacccggcgcagcat
accctgatggcgtcttataaaagtttgtttaaggactacctgctcgcgcataatttaaat
gatccggccggcgaatttatcatggtggcatctatggcgtttggtaccaactccgacagt
aaactcggcattcagaccggcacccgtgtgaatggggtaggaggtggtaacctgagcata
ttacctacgtacttttatatgtttgactctacggatgtgaggagagatattacctgtgtg
ccttatgagatcacctttgatacgatcaaaacaggtcatgcgatcaatgcgatcaatgat
gggaagttcagaaaggaatgggtgacaaatcccggctatgttttcagtgcgggtaactcc
gctacttccagcaggcctgctattaacaacagtttgcagaacatgcagctaagctggccg
ctgatcaggtttgcagatgtgctgctctggtttgcagaagctgacaatgaattgaataat
ggtcccacggctgctgcgatagcggcggtaagtcaggtgaataaacgcggtcatggcggc
ggatatacagaaacaccacccgtgatccctacggataaagctggattctttaaattcctg
gtgaaggagcgtttgctggaatttggtggcgaagggatccgaaaatatgacctgcttcgc
tggaacctgctggctacagctattcaggagacacgtgcacgtttacaggcatgggccaat
gccacagatgccttgcaccctgcttttcccctttacagctacatggaagacggacccgcc
tatgcacgtgatcctgctcagtttcccagttacctgtattacatgaagacgccgccgagg
tcgaatatagatgacttcaatccttttctgtattctttctataaaccaggacccgttgaa
tcagcacctgccggtctggtaagggtagcctggtggctgggcggcacgaccgtgccggct
gcacagacatttacaaatgcttttgccagcgggtttacacctaataaaagtgagctgatg
ccactgccgcagacgcagcgtgatgtgaatccgaatctgagtccgcaaaacccgggatat
tga
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