Chitinophaga agri: GWR21_28870
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Entry
GWR21_28870 CDS
T06416
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chih
Chitinophaga agri
Pathway
chih02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GWR21_28870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chih03021
]
GWR21_28870
Transcription machinery [BR:
chih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GWR21_28870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
HTH_40
HTH_Tnp_ISL3
HTH_24
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QHS63453
UniProt:
A0A6B9ZQP3
LinkDB
All DBs
Position
7336085..7336633
Genome browser
AA seq
182 aa
AA seq
DB search
MSTFNTISALKEGDPSVFSDIFNEYHRKVYFYILSKTHSPYIAEETTQITFIKLWDYRHQ
LNESEPVSRLIFHIARATSIDLLRKEVVKGRFLKQERPREEDTGNIADTLEAREMLLRVR
QAVTHMPPVRRKVFELSRYEFKSYKEIADQLSLSVKTVENHMSLALSYLRNLLLLLLLFF
QR
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgtttaatacaatttccgcgctgaaggaaggtgacccttccgttttcagtgat
atattcaatgaatatcaccggaaggtatatttctacatcctgtcaaagacacactctccc
tacatagctgaagaaaccacacagatcacttttattaaattatgggactaccggcatcag
ctgaatgaatccgaaccggtcagcagactgatattccacatcgccagggcgacttctata
gatctgctcagaaaggaagtcgtaaaaggccgcttcctgaaacaggaaagaccccgggag
gaagataccggtaacatagccgacacgcttgaagcccgggaaatgctgctcagggtcaga
caggcagtgacccatatgcctcctgtcagaagaaaagtttttgaactcagccgttatgaa
tttaaatcctataaggaaatagccgatcagctgtccctgtccgttaaaactgtagaaaat
cacatgtcgttagccctcagttatttaagaaatctgctcctcttattattgctattcttc
cagcgctga
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