KEGG   Chitinophaga agri: GWR21_28870
Entry
GWR21_28870       CDS       T06416                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
chih  Chitinophaga agri
Pathway
chih02020  Two-component system
Brite
KEGG Orthology (KO) [BR:chih00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GWR21_28870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chih03021]
    GWR21_28870
Transcription machinery [BR:chih03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GWR21_28870
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 GerE Sigma70_ECF HTH_40 HTH_Tnp_ISL3 HTH_24 HTH_11
Other DBs
NCBI-ProteinID: QHS63453
UniProt: A0A6B9ZQP3
LinkDB
Position
7336085..7336633
AA seq 182 aa
MSTFNTISALKEGDPSVFSDIFNEYHRKVYFYILSKTHSPYIAEETTQITFIKLWDYRHQ
LNESEPVSRLIFHIARATSIDLLRKEVVKGRFLKQERPREEDTGNIADTLEAREMLLRVR
QAVTHMPPVRRKVFELSRYEFKSYKEIADQLSLSVKTVENHMSLALSYLRNLLLLLLLFF
QR
NT seq 549 nt   +upstreamnt  +downstreamnt
atgtccacgtttaatacaatttccgcgctgaaggaaggtgacccttccgttttcagtgat
atattcaatgaatatcaccggaaggtatatttctacatcctgtcaaagacacactctccc
tacatagctgaagaaaccacacagatcacttttattaaattatgggactaccggcatcag
ctgaatgaatccgaaccggtcagcagactgatattccacatcgccagggcgacttctata
gatctgctcagaaaggaagtcgtaaaaggccgcttcctgaaacaggaaagaccccgggag
gaagataccggtaacatagccgacacgcttgaagcccgggaaatgctgctcagggtcaga
caggcagtgacccatatgcctcctgtcagaagaaaagtttttgaactcagccgttatgaa
tttaaatcctataaggaaatagccgatcagctgtccctgtccgttaaaactgtagaaaat
cacatgtcgttagccctcagttatttaagaaatctgctcctcttattattgctattcttc
cagcgctga

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