Chitinophaga agri: GWR21_30485
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Entry
GWR21_30485 CDS
T06416
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chih
Chitinophaga agri
Pathway
chih02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GWR21_30485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chih03021
]
GWR21_30485
Transcription machinery [BR:
chih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GWR21_30485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
GerE
Sigma70_r2
Sigma70_r4
HTH_40
Sigma70_ECF
HTH_23
Terminase_5
HTH_28
HTH_29
HTH_Tnp_ISL3
HTH_24
HTH_10
HTH_7
HTH_5
RepB
HTH_38
DNA_pol3_delta_C
HTH_11
HTH_36
Dimerisation2-like_dom
PhyR_sigma-like
HTH_26
Motif
Other DBs
NCBI-ProteinID:
QHS63753
UniProt:
A0A6B9ZQT7
LinkDB
All DBs
Position
7770165..7770737
Genome browser
AA seq
190 aa
AA seq
DB search
MQPDNYTNQELLGLLRAGEHRAFNEIYHRYWDKLFYIAAKKLEEYGEAESIVQDVFVDLW
RRREELDIYETLEGYLVVAVKYRIINYLARQDRIRTYEQYLISQLNTTHSGTEEWISFEE
LRRWLMKMVSGLPEKCRMAYQLREEGYTQKEIARQMQISEKTVETHISRALKTIRASISQ
LFSSLLSLLL
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctgataactataccaaccaagaattgctgggccttctcagggccggtgagcat
agggcattcaacgagatctaccatcgttattgggataaactcttctatattgctgccaaa
aagctggaggaatacggagaagcggaaagtattgtacaagacgtattcgtagatctctgg
cgccgccgtgaggaactggatatatatgagacgctggaaggttacctcgtagtggcggtc
aaataccgcatcattaactacctcgccagacaggaccgtatcagaacgtatgagcaatac
cttatcagccagttaaatacaacacactccggtacagaagaatggatcagctttgaagaa
ctgcgccggtggttgatgaagatggtctcggggctccctgagaaatgccgtatggcttac
cagttacgtgaggaagggtatacgcaaaaagaaatagcgcgacagatgcagatttctgaa
aagaccgtagaaacccatatcagccgcgctttaaaaactatccgggccagtatcagtcag
cttttttcttccctgttatcacttcttctctaa
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