KEGG   Chitinophaga agri: GWR21_30485
Entry
GWR21_30485       CDS       T06416                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
chih  Chitinophaga agri
Pathway
chih02020  Two-component system
Brite
KEGG Orthology (KO) [BR:chih00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GWR21_30485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chih03021]
    GWR21_30485
Transcription machinery [BR:chih03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GWR21_30485
SSDB
Motif
Pfam: Sigma70_r4_2 GerE Sigma70_r2 Sigma70_r4 HTH_40 Sigma70_ECF HTH_23 Terminase_5 HTH_28 HTH_29 HTH_Tnp_ISL3 HTH_24 HTH_10 HTH_7 HTH_5 RepB HTH_38 DNA_pol3_delta_C HTH_11 HTH_36 Dimerisation2-like_dom PhyR_sigma-like HTH_26
Other DBs
NCBI-ProteinID: QHS63753
UniProt: A0A6B9ZQT7
LinkDB
Position
7770165..7770737
AA seq 190 aa
MQPDNYTNQELLGLLRAGEHRAFNEIYHRYWDKLFYIAAKKLEEYGEAESIVQDVFVDLW
RRREELDIYETLEGYLVVAVKYRIINYLARQDRIRTYEQYLISQLNTTHSGTEEWISFEE
LRRWLMKMVSGLPEKCRMAYQLREEGYTQKEIARQMQISEKTVETHISRALKTIRASISQ
LFSSLLSLLL
NT seq 573 nt   +upstreamnt  +downstreamnt
atgcagcctgataactataccaaccaagaattgctgggccttctcagggccggtgagcat
agggcattcaacgagatctaccatcgttattgggataaactcttctatattgctgccaaa
aagctggaggaatacggagaagcggaaagtattgtacaagacgtattcgtagatctctgg
cgccgccgtgaggaactggatatatatgagacgctggaaggttacctcgtagtggcggtc
aaataccgcatcattaactacctcgccagacaggaccgtatcagaacgtatgagcaatac
cttatcagccagttaaatacaacacactccggtacagaagaatggatcagctttgaagaa
ctgcgccggtggttgatgaagatggtctcggggctccctgagaaatgccgtatggcttac
cagttacgtgaggaagggtatacgcaaaaagaaatagcgcgacagatgcagatttctgaa
aagaccgtagaaacccatatcagccgcgctttaaaaactatccgggccagtatcagtcag
cttttttcttccctgttatcacttcttctctaa

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