Chitinophaga sp. 180180018-2: UNH65_03660
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Entry
UNH65_03660 CDS
T11447
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chii Chitinophaga sp. 180180018-2
Pathway
chii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UNH65_03660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chii03021
]
UNH65_03660
Transcription machinery [BR:
chii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UNH65_03660
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
PEX8_C
GerE
HTH_23
HTH_16
PAW
HTH_24
PEP-utilisers_N
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WTM42676
LinkDB
All DBs
Position
complement(893037..893636)
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AA seq
199 aa
AA seq
DB search
MSNTSLPDERELLLQLAAGDEYAYTILFRHYSRQIFDVAMLYLKDKGLAKEIVQEVFMKI
WVKRADMLQVKHFKDYLFILTRNHIYDGFRKQMVRLKVYDLHIQSQPAIQDDTDHKLLER
EYDAILDKAVACLPPERKKVYLARKQGWSNEEISLQLNISVNTVKKQMSLALHTVRAFVK
ARLQNDIIPILLLIITFRK
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgaacacttccttaccagacgaacgtgaattgctcctccagcttgccgctggtgac
gagtatgcgtacaccatcctgttcaggcactacagccggcagatcttcgatgtggccatg
ctttacctgaaagacaaaggcctcgcaaaagaaattgtacaggaagtgtttatgaagata
tgggttaagagggctgatatgttgcaggtaaagcatttcaaagactatctctttattctc
acaaggaatcatatttatgatggtttcagaaagcaaatggtgaggctgaaagtctatgac
ctgcatattcaaagccagcccgccattcaggacgataccgatcacaaactgctggaacgg
gaatacgatgctattcttgataaggcagtagcctgccttccgcctgaacgcaaaaaagtt
tacctggcccggaaacaaggctggagcaatgaggaaatttccctgcaactgaatatctct
gttaacaccgtaaaaaagcaaatgagcctggccctacacacagtaagagcttttgtaaaa
gcccggcttcagaacgacattattcctatcttattgttaatcattactttccgaaaataa
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