Chitinophaga sp. 180180018-2: UNH65_04450
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Entry
UNH65_04450 CDS
T11447
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chii Chitinophaga sp. 180180018-2
Pathway
chii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UNH65_04450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chii03021
]
UNH65_04450
Transcription machinery [BR:
chii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UNH65_04450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_23
HTH_40
DUF722
HTH_28
HTH_10
Motif
Other DBs
NCBI-ProteinID:
WTM42834
LinkDB
All DBs
Position
1081238..1081828
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AA seq
196 aa
AA seq
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MENKQINEITIREALMKGSREALGELFLLYYPRLLGYACKYVTRETAEDIIQDVFIQLQQ
KGIAGDIRQTMQGYLFRAVHNSCVDHLRHEMVHRRYVDKTLTSLSLDEAAWYDPENGKQS
LLFAGDDHQVWNAIEQLPPKCRAILQLRYKDGLKTREISGIMGISARTVETQLYKAIRLL
RSSIRKVKLFVWSFVL
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaataaacaaattaacgaaatcactatccgggaagccctgatgaagggcagcagg
gaggcgctgggcgagctgtttctcctgtattatccccgtttgctcggatacgcctgtaag
tacgttaccagggaaaccgcggaagatatcatccaggatgtttttattcagcttcagcaa
aaaggcattgccggcgatatcaggcaaaccatgcagggatacttgttcagagcggtgcat
aacagttgtgtagaccatttacgccatgaaatggtacaccggcggtacgtagataaaacc
ctcacctcattatccctcgacgaagcagcctggtatgaccctgaaaacggtaaacagagc
ctgttgtttgcgggagacgaccatcaggtatggaatgctatagaacaacttccacccaaa
tgccgcgctatcctccagctgcgttataaagacgggctgaagacccgggaaatatccggc
atcatggggatatccgcccgtactgtagaaacacagctgtataaagccatccgtctactc
cgttccagtatcagaaaagtaaaattgttcgtctggtcgtttgtcctttag
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