Chitinophaga sp. 180180018-2: UNH65_04495
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Entry
UNH65_04495 CDS
T11447
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chii Chitinophaga sp. 180180018-2
Pathway
chii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UNH65_04495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chii03021
]
UNH65_04495
Transcription machinery [BR:
chii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UNH65_04495
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
HTH_20
HTH_40
Sigma70_ECF
HTH_10
PF0610-like_N
GerE
HVO_A0261_N
HTH_24
HTH_30
HTH_28
HTH_38
DUF2805
HTH_Tnp_ISL3
HTH_22
DUF6362
DUF722
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
WTM42843
LinkDB
All DBs
Position
complement(1097037..1097636)
Genome browser
AA seq
199 aa
AA seq
DB search
MSNEDVVLLRKLQQGDTGAFITLYNQYHPSLYTYILHFINIPELAEDVLQEVFTKIWEIR
ERINPELCFSGYLYRITRNRVFKLLKKISADEQLRTQTMQELHRQTEDADTRLLWKQYES
LLHEAIAQLPPQRQRVFRLCREESKSYEEVATELGISRNTVKEHMVLAMRSIQFFLYKHT
DGVFPILLFSAMILSYEKN
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaatgaagatgtcgttttgctgaggaagttacagcagggagatactggggcattt
attactttatacaaccaatatcatccgtcgctttacacttatattctccacttcattaat
atccctgaacttgcagaagatgtactgcaggaggtatttaccaagatctgggagataagg
gagcggatcaatcctgagctgtgtttcagcggctatctttaccgtattacccgtaaccgt
gtatttaaattactgaagaagatatcggccgacgagcaactccggacgcaaacgatgcag
gaactgcaccggcaaaccgaagatgcggatacccgcctgctttggaagcaatacgaatcc
cttttgcatgaagccattgcccagcttccccctcagcgccagcgtgttttcaggctgtgc
agggaggaaagtaaaagttatgaggaagtggctacggaactggggatttccaggaatact
gtgaaagagcatatggtcttggcgatgaggagtatacagttttttttgtataagcatacg
gatggggtgtttcccatcctcttattttccgcgatgatcttaagctacgaaaaaaattaa
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