Chitinophaga sp. 180180018-2: UNH65_07310
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Entry
UNH65_07310 CDS
T11447
Name
(GenBank) HTH luxR-type domain-containing protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chii Chitinophaga sp. 180180018-2
Pathway
chii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UNH65_07310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chii03021
]
UNH65_07310
Transcription machinery [BR:
chii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UNH65_07310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_40
HTH_10
HTH_23
HTH_38
HTH_24
HTH_30
HTH_5
HTH_29
PhyR_sigma-like
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WTM43399
LinkDB
All DBs
Position
1791656..1792240
Genome browser
AA seq
194 aa
AA seq
DB search
MDIENGGLPDEFLLVEKLRQGDERAFRDLYDFYWEKQYDLAYYKLGVRELAEEITQEVFV
ALWVQKADLDPGKPVGAWLYGVTKNRILNAYRRQVSHHKYLQHAPMQEETNNTTEQLSFN
ELNALVQQRISELPDKCREVFTLSRIQGFNTRQIAETLNISPKTVNNHLVKALKIMRGNL
KDYITLLILLSIHR
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgaaaatggtggacttccggatgaatttttactggtagaaaagttgcggcag
ggcgatgaaagggctttccgcgacctgtatgatttctattgggaaaagcagtacgacctt
gcctactataaactgggcgtgagagaactggcggaagaaattacacaggaggtattcgta
gcgctatgggtgcagaaagccgacctggaccccggcaagccggtgggggcctggttatat
ggagttacaaagaaccgtatattgaatgcttaccggagacaggtatcgcaccataaatac
cttcagcacgcccctatgcaggaggaaaccaataataccacagagcagctttcctttaat
gagctgaatgccctggtgcaacaacgtatcagtgaattacctgataaatgcagggaagta
tttaccctgagtcgtatacagggatttaatacccggcagattgctgaaaccctgaatatt
tccccgaaaacggtgaataatcacctcgtaaaggccctcaagataatgagaggcaacctg
aaagactatattaccctcctgatcctgttatcgattcacaggtaa
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