Chitinophaga sp. 180180018-2: UNH65_09480
Help
Entry
UNH65_09480 CDS
T11447
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chii Chitinophaga sp. 180180018-2
Pathway
chii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UNH65_09480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chii03021
]
UNH65_09480
Transcription machinery [BR:
chii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UNH65_09480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
GerE
Sigma70_ECF
PhyR_sigma-like
HTH_17
HTH_10
HTH_28
HTH_Tnp_ISL3
DUF4627
Motif
Other DBs
NCBI-ProteinID:
WTM43832
LinkDB
All DBs
Position
complement(2312505..2313068)
Genome browser
AA seq
187 aa
AA seq
DB search
MLLNKAEVAAFDSIYHQYHQAVFKNICKLVPQQEAAEDILQEVFLALWNNRHKLSLTSEV
DRWLFVVSYNKSIQYLKTAAKEKSLLALHPEQPVSTDDDNFAILKDMQLHLISDAIEKLS
PRKKMIFRLCRLEGKSLQEAASILGISPHTAKEYLKASSAFIKTYIASQQATAPLAGLLF
LSIYFGY
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgctactcaacaaagctgaagttgctgcattcgacagtatctatcatcaatatcaccag
gccgtgttcaaaaatatctgcaagctggttcctcaacaggaagcagcagaagatatcctg
caggaggtatttctggcattatggaacaaccgccataaactgtcactgacaagcgaagta
gaccgctggctgtttgtggtaagctataataaatccattcaatacctgaaaacagccgcc
aaagaaaaaagcctgctggccttacaccccgaacagcctgtatctacagacgacgataac
ttcgctattctgaaagacatgcagctgcacctgatcagcgatgccattgaaaaattatct
cccagaaaaaaaatgatcttccggctttgccggctggaaggaaaatcgttgcaggaagct
gcttctatcctcggcatatctccgcatacagcaaaagaatatctcaaagcatcctctgcc
tttattaaaacatatatcgcctctcagcaggccaccgcacccctggcgggtttgttgttc
ctcagtatctacttcggatactga
DBGET
integrated database retrieval system
