Chitinophaga sp. 180180018-2: UNH65_11265
Help
Entry
UNH65_11265 CDS
T11447
Name
(GenBank) RNA polymerase sigma-70 factor (ECF subfamily)
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chii Chitinophaga sp. 180180018-2
Pathway
chii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UNH65_11265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chii03021
]
UNH65_11265
Transcription machinery [BR:
chii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UNH65_11265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
P22_AR_N
Motif
Other DBs
NCBI-ProteinID:
WTM44187
LinkDB
All DBs
Position
complement(2837632..2838243)
Genome browser
AA seq
203 aa
AA seq
DB search
MYNDNINTEYELLLQVSDGDRQAFRQLFETYWDQVFGSCLHLTKSPELAKDLSQDIFLKV
WDHRDKLPDIKNFKGYLFTIARNMVRDQLRTTVFRESNREFLQEYFSGNAISPQQLLERK
QLGHQVQAAIKSLPPKLQQVFTLSHLEGLSHKEIAGRLEISPLSSKTYMVRALLLLRKLL
VNDPDNLFIITLLYLGHAYFHFF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttgtataacgataacataaatacagaatatgagctgttgctgcaggtgtcggatggcgac
cggcaggcattccggcagttatttgaaacttattgggatcaggtgttcggctcctgtctt
catctgaccaaatctcctgaattggccaaagatctcagccaggatattttcctgaaagtc
tgggatcatcgtgataaattaccggatataaagaattttaaaggatacctgttcaccatt
gcccggaacatggtacgggaccagctccggacaacggtattccgggaatcgaaccgggaa
ttcctgcaggagtacttctcgggcaatgctatctctccgcaacagctgctggaacgcaag
cagttgggacaccaggtacaggctgctatcaagagcctgccccccaaactgcaacaggta
tttacactcagccacctggaaggccttagtcacaaagaaattgcgggccggctggaaatc
tccccgctgtcgtccaaaacctatatggtacgtgcattgctcctgttgcgaaagctgctg
gtgaatgaccccgacaacctgtttataattactttactatacctgggccatgcttatttt
cattttttttga
DBGET
integrated database retrieval system
