Chitinophaga sp. 180180018-2: UNH65_11410
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Entry
UNH65_11410 CDS
T11447
Name
(GenBank) HTH luxR-type domain-containing protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chii Chitinophaga sp. 180180018-2
Pathway
chii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UNH65_11410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chii03021
]
UNH65_11410
Transcription machinery [BR:
chii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UNH65_11410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_23
PhyR_sigma-like
HTH_28
HTH_10
HTH_20
HTH_17
HTH_40
HTH_8
PF0610-like_N
Xre-like-HTH
HTH_24
MerR
Motif
Other DBs
NCBI-ProteinID:
WTM44216
LinkDB
All DBs
Position
2874059..2874655
Genome browser
AA seq
198 aa
AA seq
DB search
MMEEISEWQMQIARYDDEQAFARLFRHMYDRLLHFCIRYVHVKEAAEEIVSDVFVKLWNR
RAELEKVTNLQVYLFVMVKNHSLNYLETYSNLRIVPLSGTDTADLRNSIDLERDLEWKEM
RFKMDQVVASLPAQCRRIFQLIKEDGFKYKEVAEILDISPRTVETQLFRAMRRLNNVLGR
NRGVIPPLIFFLAVASWL
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggagattagtgaatggcagatgcagatagcacgttatgacgatgaacaggcc
tttgcccgcctgttccgccatatgtatgatcgtttattgcatttttgtatcaggtatgta
catgtgaaggaagcggcggaagaaattgtatccgacgtttttgtaaaactctggaaccgc
cgtgctgagttggagaaagtgaccaacctgcaggtatatctttttgtgatggtgaagaac
cattccctgaattatctggaaacctattctaatctccgtatcgtaccactctccggtacc
gataccgccgatctgcgcaacagcatagacctggaacgcgacctcgaatggaaagaaatg
cgctttaaaatggaccaggtagtagccagtctgcctgcccaatgccgccgcatcttccag
ctgatcaaggaagacggtttcaaatacaaagaagtcgcagaaatcctcgatatttctccc
cgcaccgtcgaaacccagttattccgcgccatgcgccgcctcaacaacgttctcggccgc
aacaggggcgtaataccgccgttgatattctttctggcagtggcttcctggctttga
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