Chitinophaga sp. 180180018-2: UNH65_13155
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Entry
UNH65_13155 CDS
T11447
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
chii Chitinophaga sp. 180180018-2
Pathway
chii03030
DNA replication
chii03430
Mismatch repair
chii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UNH65_13155
03430 Mismatch repair
UNH65_13155
03440 Homologous recombination
UNH65_13155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chii03032
]
UNH65_13155
03400 DNA repair and recombination proteins [BR:
chii03400
]
UNH65_13155
Enzymes [BR:
chii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UNH65_13155
DNA replication proteins [BR:
chii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UNH65_13155
DNA repair and recombination proteins [BR:
chii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UNH65_13155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
DUF7508
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WTM44561
LinkDB
All DBs
Position
3311674..3313041
Genome browser
AA seq
455 aa
AA seq
DB search
MYAIVDIETTGGHASANGITEIAIFLYDGKEITHHYQTLVNPGIPIPLYISSLTGITNEM
VADAPPFEAVAPLVFDLLKDKIFVAHNVNFDYSFIKHQLGNAGFSLQTKKLCTVRLGRKI
FPGLRSYSLGNICKHFDIVINGRHRAGGDAEATAHLFGLLLANDKEKAIAAALRAGSKEQ
FLPPNLPPEQVKSLPSNPGVYYFHDHKDKVVYVGKAKDLSKRVNSHFTGHSTSRQRQNFL
RTIHRISYQETATELMASILESIEIKRLWPIFNYSQKRIEYRYGFYLFEDQHGYMRLVIE
KKRKYSHPVHSFNLLIDGHRLLRSLIREFELCPKLCFLQKGNGTCAGITAATCKGACEHT
EEPEHYNARMKAAVAFLQEQQPSVVIVDKGRNSNEKSCILMEKGRFYGMGYIPTSVNTDD
VEQFREYLTPYAENEVIISLLRPYAGNTRQLAGSL
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaatcgtagatattgaaactactggcggtcatgccagtgccaatggcatcacg
gagatcgccatattcctgtatgacgggaaggaaataacacatcactaccagacactggta
aacccgggtattcccattccattatatatatcttccctgacgggtattaccaatgagatg
gtggccgatgcaccaccttttgaagcagtggcgccgctggtgttcgatctgttgaaagac
aagatctttgttgcgcacaacgtgaacttcgattactcgtttatcaagcaccagttgggt
aacgccgggttcagcctgcagacgaaaaagttatgtaccgtaagactgggaagaaagata
ttcccgggattgagatcttacagcctcggaaatatctgcaagcatttcgatattgttatc
aacggcaggcaccgtgcaggtggagatgccgaagctacggcccatctgttcggattattg
ctggccaatgacaaggaaaaagcgattgcggctgccctcagggccggatcaaaagaacag
ttcctgccgcctaacctgccaccggaacaggtaaaatccctgccttcgaacccgggagta
tactacttccacgaccataaggataaagtggtatatgttggtaaagcgaaagacctgagc
aaacgggtcaacagtcattttaccggacatagtacgagccggcagcgtcagaatttcctg
cgtaccatacaccgcatcagctaccaggaaacagctacggagctgatggcctccatactg
gaatccattgagataaagcgtttgtggcccatcttcaattactcccagaaacggatcgaa
taccgttacgggttttatctgttcgaagatcagcatggttatatgcgcctggtgatcgaa
aagaaacggaagtattcccaccccgtgcacagcttcaacctgctgatcgacgggcaccgg
cttttgcgctcgctgatacgggaatttgagttatgccccaagctctgtttcctgcagaaa
ggaaacggtacctgtgcgggtatcaccgcggccacttgtaaaggcgcctgtgaacacacg
gaagaaccggaacattacaatgcccgaatgaaagcggctgtcgcctttctccaggaacaa
caaccctccgtggtgatcgtggataaaggacgcaacagtaatgaaaaaagctgtatcctc
atggaaaagggacgattttatggcatgggctatatacccaccagcgtcaataccgatgat
gtggaacaattccgggaatatctcacgccctacgccgaaaacgaggtgatcatcagtttg
ctccgcccatacgccggcaatacccgccagctggcaggatccctttga
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