Chitinophaga sp. 180180018-2: UNH65_13245
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Entry
UNH65_13245 CDS
T11447
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chii Chitinophaga sp. 180180018-2
Pathway
chii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UNH65_13245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chii03021
]
UNH65_13245
Transcription machinery [BR:
chii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UNH65_13245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
HTH_23
HTH_10
HTH_40
HTH_20
RecX_HTH1
HTH_26
PF0610-like_N
HTH_24
HTH_5
Motif
Other DBs
NCBI-ProteinID:
WTM44579
LinkDB
All DBs
Position
3332279..3332839
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AA seq
186 aa
AA seq
DB search
MREEANIQLLVERVASLGDEQAYRALFRLFYKPLSQFAYSIVKSWESAEEIASDVFMNIW
KHRERLLQVENLRVYLYVSAKNIALNYLNKQARTQHFSLDELSVDIGVSHVTPEQIFISG
EMVKRIEAAVNALPPKRKMIFKLIREDGLKYKEVAQILDISVNTIDVHMAQALKKISEAI
HLSFKK
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
ttgagggaggaagctaatatacagctgttggtggagcgggtggcatcgctgggagatgaa
caggcctacagggcattattccgtttattctataagccattaagccagtttgcctattcc
atcgtaaaatcatgggaatccgccgaagaaatagcttcagatgtttttatgaacatctgg
aagcaccgggagcgcctgctccaggtagaaaacctcagggtttacctctatgtttccgca
aaaaatattgccctcaattacctgaataaacaggcccgtacccaacatttcagtctggat
gaactgagcgtcgacattggcgtaagccatgttactcccgagcagatctttatatccggc
gaaatggtgaaaaggatagaagcggcagtcaatgccttgcccccgaaaaggaaaatgatt
ttcaagctcatccgtgaagatgggcttaaatacaaagaagtagcccagattcttgatata
tccgtgaacaccattgatgtacatatggcccaggccttaaaaaagatcagcgaggccatc
catctctcgtttaaaaaataa
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