Chitinophaga sp. 180180018-2: UNH65_14760
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Entry
UNH65_14760 CDS
T11447
Name
(GenBank) Sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chii Chitinophaga sp. 180180018-2
Pathway
chii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UNH65_14760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chii03021
]
UNH65_14760
Transcription machinery [BR:
chii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UNH65_14760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_24
HTH_11
GerE
HTH_AsnC-type
wHTH_Par
Rep_fac_C
PF0610-like_N
HTH_Tnp_ISL3
HTH_36
HTH_40
HTH_Mga
Rpr2
Motif
Other DBs
NCBI-ProteinID:
WTM44881
LinkDB
All DBs
Position
complement(3691986..3692603)
Genome browser
AA seq
205 aa
AA seq
DB search
MEKLSDHGLLLLIRKGNHAAFTVLVNRYWEEMYTYVRGRIKQGVDAQDIVQDIFISCWNN
RERLYAAENGRFTAYLYQAARYAIIDYFSKPGITVYNDILLEAAESRQMENNSEARIYLK
ELEQHLRQEVEQLPERLKIPYLLSREANLSMKDIARKMSLSEQTVKNNITLALHILRTRL
HENEHYLGVLMLLLAIPSYNELIIP
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagctatcggaccacgggttgttgctactgattcggaagggaaatcatgctgct
ttcactgtactggtaaacaggtattgggaagagatgtatacttatgtcaggggccggata
aagcagggagtggatgcgcaggatattgtacaggatatttttattagttgctggaacaac
cgggaacggctatacgccgccgaaaacggccggtttactgcttatctttatcaggcggcc
cgctatgcaattatagattacttttcgaaacctggtattactgtttacaatgatattttg
ctggaagcagcagaaagcaggcagatggagaataattccgaagcgaggatatacctgaaa
gagctggaacaacacttgcgccaggaggtagagcagctgccggaacgattgaagattcct
tatttacttagcagggaagcgaatctcagcatgaaagatatagcgaggaaaatgtcgctt
tccgaacagactgtaaaaaacaatattaccctcgcccttcatatcttacggacgcgcctg
cacgaaaatgaacattatctgggagtattgatgctgttgctggctataccgtcttacaat
gagttaataattccataa
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