Chitinophaga sp. 180180018-2: UNH65_15480
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Entry
UNH65_15480 CDS
T11447
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chii Chitinophaga sp. 180180018-2
Pathway
chii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UNH65_15480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chii03021
]
UNH65_15480
Transcription machinery [BR:
chii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UNH65_15480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
GerE
HTH_40
Sigma70_ECF
HTH_24
PF0610-like_N
PhyR_sigma2
HTH_11
HTH_7
HTH_5
HTH_10
HTH_23
Motif
Other DBs
NCBI-ProteinID:
WTM45021
LinkDB
All DBs
Position
3864178..3864762
Genome browser
AA seq
194 aa
AA seq
DB search
METSAYNERILLLRLAEGNDDVFADLFHHYRHRIYSIALRLLGEPAQAEDVVQDVFMKMW
QKRDALHEISHFKAYLFTVTRNHIFASLKLLAREQLMESELSVAMAAPQRETPMINKEYE
QILEHAIAQLPPQQGLIYRLSKEEGLKRNEIAERLQLSPETIKAHLAHAMRSIRAFCLAR
MDLNTFLILIWIYC
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaagtgcctacaatgaaagaatacttttattgcgcctcgccgaaggcaatgac
gacgtattcgctgacctcttccaccattaccgccatcgtatatacagcatagcactccgc
ctgctgggtgaacccgctcaggcagaggatgttgtacaggatgtatttatgaagatgtgg
cagaaacgtgatgcccttcatgaaatcagtcattttaaagcatatctctttactgttaca
cggaatcatattttcgcctccctgaaactactggcccgggaacaactgatggaatccgag
ctttctgtagccatggctgccccgcagcgggaaacacccatgatcaacaaggaatatgaa
cagatattggaacacgctatcgcccaactgccgccgcaacaaggcctgatataccggctc
agtaaggaggaagggctgaaaagaaatgaaatcgcggagcggttgcaattatcgcccgaa
acaattaaggcccacctggcccatgctatgcgctctatccgcgctttctgcctggcccgg
atggaccttaacaccttccttatattaatatggatctattgctaa
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