Chitinophaga sp. 180180018-2: UNH65_20885
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Entry
UNH65_20885 CDS
T11447
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chii Chitinophaga sp. 180180018-2
Pathway
chii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UNH65_20885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chii03021
]
UNH65_20885
Transcription machinery [BR:
chii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UNH65_20885
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
RPN13_C
GerE
PhyR_sigma2
HTH_23
EAF5
HTH_10
HTH_28
Type_III_YscX
PCI
HTH_24
Alpha_humulene_synt
Motif
Other DBs
NCBI-ProteinID:
WTM46095
LinkDB
All DBs
Position
5286644..5287204
Genome browser
AA seq
186 aa
AA seq
DB search
MDDQKLLAYLSSDNELAFEGIFRKYFVPLTGFANAYLNNPEQAKDMVQAVLLRLWEQRES
LEIHTALKPYLYNAVRNSCLNELQKNKTQQKRLSAFLPETSEVINSRIEYAELRQQIHHA
IAALPEECRRIFILSRFEKRRYSEIATQLGISVKTVEAQISKALRILRVRLAGLFLVFLF
FLRNFF
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccaaaaactgttggcttatttaagttcggacaacgagttggcatttgaaggg
atcttccggaagtattttgttccgctgacaggttttgcaaatgcttacctcaataatccg
gaacaggccaaagacatggtacaggctgtattgctgcgtctgtgggagcaaagggaatcg
ctggaaatacataccgccctgaaaccctacctgtacaatgcggtcaggaacagttgtctg
aacgaattacaaaaaaacaaaacacaacagaaacgattgtcggccttccttcccgaaaca
agtgaagtgatcaattcccgtattgaatatgcagagctccgccaacagatacaccacgct
atagccgccctgccggaagagtgccgcaggatattcatattaagccgcttcgaaaagcgc
cgttatagtgaaattgccacccagctgggtatttctgttaaaacagtggaggcacagatc
agcaaagctttgaggatactaagagtacgactggcgggccttttccttgttttcttattt
tttttaagaaattttttctga
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