Chitinophaga sp. 180180018-2: UNH65_23340
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Entry
UNH65_23340 CDS
T11447
Name
(GenBank) 3'-phosphate/5'-hydroxy nucleic acid ligase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
chii Chitinophaga sp. 180180018-2
Brite
KEGG Orthology (KO) [BR:
chii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chii03016
]
UNH65_23340
Enzymes [BR:
chii01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
UNH65_23340
Transfer RNA biogenesis [BR:
chii03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
UNH65_23340
Prokaryotic type
tRNA splicing ligases
UNH65_23340
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NCBI-ProteinID:
WTM46580
LinkDB
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Position
complement(5927798..5929198)
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AA seq
466 aa
AA seq
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MGSLKTKELSKIGYTNDQARSLVINIISRHFKHHTRQEIISLLEDIKADPAKYQSDEVLG
RIAATFLDEPAECRFKSYDLLEQTGQLKVYGGKEIERSAKQQMEVAMALPVTVQGALMPD
AHTGYGLPIGGVLAASNAVIPFAVGVDIGCRMALSILDEGESFLKRYGYQVKVALKDFTH
FGMEGGLDFQQEHEVLDSPAFQSTEMLRRLQIKAARQLGSSGSGNHFVEFGLITLKEDNA
LQLPAKQYLALLSHSGSRGLGANIAQHYTQIAMNSCKLPKSAQQLAWLDMNSEAGQEYWL
AMNLAGDYARACHDRIHINLLKALGLQALATVENHHNFAWKDTLADGREVIIHRKGATPA
HAGEMGIIPGSMCSAAYLVMGKGVSQSLYSASHGAGRAMSRARAKENMTVSGMKKMLSAA
GVTLIGGSVEENPLAYKDIESVIRAQEELIEIQGRFVPAIMRMNKD
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtttaaaaacaaaagaattaagtaaaataggttataccaatgatcaggcgagg
agtctggttatcaatattatctcccgtcatttcaagcatcataccaggcaggagatcatt
agtttgctggaagatatcaaggcagatcctgcgaagtaccagtcggacgaagtgttaggc
cgcattgcagccactttcctcgatgaaccggcggaatgccgtttcaagtcgtacgacctg
ttggagcaaaccggccagctgaaagtatacggcggcaaagaaatagaacgttccgccaaa
cagcagatggaagtagcgatggcactgccggtaaccgtgcagggagcactgatgccggat
gcacataccggctatggcctacccatcggaggagtactggcggccagtaatgcggtgatt
cctttcgcagtaggcgtagacattggttgccgtatggcgctgagcatattggatgaagga
gaaagtttcctgaagcgttacggttaccaggtaaaagtggcgctgaaagacttcacacat
ttcggtatggaaggcggactggattttcagcaggagcatgaagtactggatagtccggcg
tttcagtcgacggaaatgctgcgtcgtttgcagatcaaagccgccaggcagctgggttct
tccggcagcggcaatcacttcgtggagttcgggctgataacgttgaaggaggataatgct
cttcagctgcccgctaaacaatacctggctttattgtcgcattccggcagtcgcgggttg
ggcgccaacattgcgcagcattatacgcagatagcgatgaatagctgcaagctgccgaaa
tcggcgcagcaactggcctggctggatatgaacagtgaggcagggcaggagtactggctg
gcgatgaacctcgcaggcgattatgccagggcgtgccacgaccgtatacatatcaatttg
ttgaaggcgctgggtttgcaggcgctggccacagtggagaatcatcacaattttgcctgg
aaagataccctggcagatggacgggaagtgattattcaccgcaaaggtgctacgccggcg
catgccggagagatgggaattattccgggtagcatgtgcagtgccgcttacctcgtaatg
ggtaaaggcgtgtcgcaatcgctttactccgcctctcatggcgcgggccgtgctatgagc
cgtgcgcgggcaaaagaaaatatgaccgtttctgggatgaaaaaaatgttatcggcagcg
ggcgtaacgctgattggtggcagcgtggaagagaatccgcttgcgtacaaagatatagaa
agtgtgattcgtgcgcaggaagagttgattgagatacagggtcggtttgtgccggcgatt
atgagaatgaataaagattag
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