Chitinophaga sp. 180180018-2: UNH65_24035
Help
Entry
UNH65_24035 CDS
T11447
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
chii Chitinophaga sp. 180180018-2
Pathway
chii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UNH65_24035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chii03019
]
UNH65_24035
03016 Transfer RNA biogenesis [BR:
chii03016
]
UNH65_24035
Enzymes [BR:
chii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
UNH65_24035
Messenger RNA biogenesis [BR:
chii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
UNH65_24035
Transfer RNA biogenesis [BR:
chii03016
]
Prokaryotic type
tRNA degradation factors
UNH65_24035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
RNase_II_C_S1
HutF_N
KH_2
Motif
Other DBs
NCBI-ProteinID:
WTM46715
LinkDB
All DBs
Position
complement(6086642..6088981)
Genome browser
AA seq
779 aa
AA seq
DB search
MNLTPISVKFDIGDGRMVTIETGKLARQADGAVTVRLGNAILLATVVANKEPKPGQSFFP
LTVDYQEKFASAGRIPGSFFKREGRLSDYEVLISRLIDRALRPLFPDNYLCEVQVLVTLI
SSDPEVMPDALACLAASAALAVSDVPIQEIISEVRVARIEGKYVINPNRSDLAKADMDFI
IGATDKNIMMVEGESKECQEEDLIQAIEAAHAAIKVQVKAQEELRDLKGVKGKREFALPH
HNEELEAKVAAFAKDKIYQVAKSASAKHDRAEAFAKISEELKEHLGELPEEDQPLVGEYF
HALEKEVIRNMILDESVRLDGRSLEQVRPLAMETDILPSPHGSALFTRGETQSLTTVTLG
TPEDELLIESAAVSNYSKFILHYNFPPFSTGEVKMMRGPGRREVGHGNLAMRSLKQMMPG
SDYAYTVRVVSDILESNGSSSMATVCAGSLALMDAGVPIPKHVSGVAMGLISRAADGKWA
VLTDILGDEDHLGDMDFKVTGTRDGIVGIQMDIKVDGLSMDVMRSALAQARKGRLHIIEA
MYEAVPAARPEPKPHAPRMEKIIIDREFIGAVIGPGGKVIQEIQRETGTTINIEEVGETG
EVSIFSAQKDGLDRAVAWVKGIIAVPEVGEVYDSVVKSIMPYGAFVEFMPGKQGLLHISE
VSWKRLETMEGVLSEGEKVKVKLTGTDPKTGKFKLSRKVLMPKPEGYVEREDRGERGDRG
DFRDRGDRGDRRGGHRDDRRGGGDRRDFNRGDRGDRRSGGDNSSQNAGPEKPQEPMFDE
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgacacctatttcagtgaagttcgatataggagacggtcggatggtgaccatc
gaaacaggcaaattggcccgccaggccgatggtgctgttacggtgcgtttagggaatgcg
attttgctggccaccgtggtagcaaataaagaacccaaaccaggccagtctttcttcccc
cttacagttgactaccaggaaaaatttgcttctgccggacgtattccaggctccttcttc
aaacgcgagggccggttatctgactacgaagtgctgatctcccgcctgattgatcgtgcg
ctgcgtccgctgttccccgataactatttatgcgaagtacaggtgctggttaccctgatc
tcttctgatccggaggtaatgcctgatgctttagcctgcctggcagcatccgctgcactg
gcagtatccgatgtacctatccaggaaattatttctgaggttcgtgttgcccgcatcgaa
ggcaagtatgtgattaaccctaaccgctctgacctcgccaaagccgatatggatttcatc
attggtgctaccgacaagaacatcatgatggtggaaggcgaaagtaaagagtgccaggaa
gaagacctgatccaggctattgaagcggcacatgctgctatcaaggtgcaggtaaaagca
caggaagaactgcgtgatctgaaaggtgtgaagggcaaacgtgaatttgctttacctcac
cacaacgaagaattagaggcgaaagtagctgctttcgcgaaagataaaatttaccaggtt
gctaaatctgcctctgccaagcacgatcgtgctgaagcttttgcgaagatttcagaagaa
ctgaaagagcacctgggcgaattgccggaagaagaccagccactggtaggagaatacttc
catgcactggagaaagaggtaatacgcaacatgatcctcgacgaatctgttcgcctcgat
ggtcgtagcctcgagcaggtacgtccgctggcaatggaaacagatatactgccttccccg
catggatctgcactgttcacccgtggtgaaacacagtcactgaccactgttacactcggt
actccggaagatgaactgctgatcgagagtgctgctgtttctaattattctaaatttatc
cttcactataacttccctccgttctctaccggtgaagtgaaaatgatgcgcggccccggc
cgtcgtgaagttggtcacggtaacctggcgatgcgttccctgaagcagatgatgccgggt
agcgattacgcctatacggtaagggtggtatccgatatcctcgaatcaaacggttcttcc
tctatggctaccgtttgcgccggctccctcgccctgatggatgctggtgttcctattcct
aagcacgtttccggtgtggcaatgggcctgatttcccgtgctgctgatggaaaatgggcg
gtgttaactgacatcctgggagatgaggatcacctcggtgatatggactttaaagtaaca
ggtacccgtgatggtatcgtaggtatccagatggatattaaagtagatggtctgagtatg
gatgtaatgcgctctgcgctggctcaagcccgcaaaggccgcctgcatatcattgaggcc
atgtacgaagccgtacctgctgcccgtcctgaacctaaaccacatgctccacgcatggag
aagatcatcatcgatcgcgaatttattggtgcagtgattggacccggtggaaaggtgata
caggaaatccaacgcgaaaccggtactactatcaatatcgaagaagtaggcgaaaccggc
gaagtgagcatcttctctgcacagaaagatggtctggacagagctgttgcctgggttaaa
ggaattattgccgtgcctgaagtaggcgaggtgtacgactccgtagtaaaatcaatcatg
ccttatggtgctttcgtagagttcatgcctggtaaacaaggcctgcttcacatctctgaa
gtttcctggaaacgcctggaaacaatggaaggtgtactcagcgaaggtgaaaaagtaaaa
gtgaaactcaccggtacagatcctaaaaccggtaagttcaaacttagccgcaaagtgctg
atgcctaaacccgaaggatacgtagaacgcgaagaccgtggagagcgtggcgacagaggc
gatttccgtgatcgcggagatcgtggcgacagacgcggtggtcatcgtgacgacagacgc
ggtggtggcgacaggcgcgatttcaatcgtggcgacagaggcgacagacgcagcggtgga
gataattcttctcagaacgccggtcctgaaaagccacaggagccaatgttcgacgaataa
DBGET
integrated database retrieval system
