Chitinophaga sp. 180180018-2: UNH65_28295
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Entry
UNH65_28295 CDS
T11447
Name
(GenBank) 3'-phosphate/5'-hydroxy nucleic acid ligase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
chii Chitinophaga sp. 180180018-2
Brite
KEGG Orthology (KO) [BR:
chii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chii03016
]
UNH65_28295
Enzymes [BR:
chii01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
UNH65_28295
Transfer RNA biogenesis [BR:
chii03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
UNH65_28295
Prokaryotic type
tRNA splicing ligases
UNH65_28295
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Other DBs
NCBI-ProteinID:
WTM47528
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Position
complement(7085644..7087059)
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AA seq
471 aa
AA seq
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MSEVKINGKVLLEAGFRQGPVIRAAIDAIAQHFATVSAEEAIELLKKVLADPAAYAGDAV
FGEVARLLQVPQAPEIIALREQAVPFAVFGEACIEEGAIRQLNNAVRLPVAVAGALMPDA
HQGYGLPIGGVLATDNAVIPYGVGVDIGCRMCLSILDLPVDSITTRMDLYRKHLNDWTVF
GAGAAWRKKREEDAILERNEFREIGFVRNLHEKAAQQLGTSGSGNHFVEWGIVTITTTEN
EWQLQPGDYVAILSHSGSRGLGAQIAGHYTQVAKQLCRLPDAAKHLAYLDLDSEAGQEYW
LAMNLAGDYASACHHQIHKRLIKAAGATLLARVENHHNFAWKEMYEGREVIVHRKGATPA
GKGVLGVIPGSMTAPGFIVRGKGDADSLQSASHGAGRTMSRTRAIATINQHDWQQQLAAH
GVTLIGGGLDEAPAAYKDIETVMAAQAGLVDVLGRFAPKIVRMADGGPAED
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagtaaaaattaatggtaaagtattactggaggcgggtttccgtcagggccct
gtaatccgggcggcaatagacgccatcgcgcagcattttgcaactgtatctgcagaagag
gctattgaactgttaaagaaagtgctggcagatccggctgcctatgcgggtgatgctgta
tttggcgaggttgcccgcttattgcaggtaccgcaggcaccggaaatcattgcgctaaga
gaacaggcagtgccgtttgctgtatttggtgaagcgtgcattgaagaaggagcgatcagg
cagctgaacaacgctgtgcgtctgccggtggcagtagccggagcattgatgccggatgcc
catcaggggtacggattacccatcggtggtgtactggccactgataacgcagtgatccct
tacggggtaggagtggatattggatgccgtatgtgtttgagtatcctggatctgccggtg
gattcaataactaccaggatggatttatataggaagcacctgaatgactggactgtattc
ggagcgggagctgcgtggaggaagaagagagaagaagatgccatattggaaagaaatgag
tttagagagattggatttgtaagaaacctccatgagaaagctgcgcagcagctgggaact
tcgggttccggtaaccactttgtggagtgggggattgtaaccattactaccacagaaaat
gaatggcagttgcagccgggcgattatgtggctatcctttcgcattcaggatcccgtggc
cttggggcacagatagccggccattatacacaggtagccaaacagctatgccggttgccc
gacgccgcgaaacatctcgcttatcttgacctggattcagaagcaggtcaggagtactgg
ctggcaatgaacctggctggtgactatgcctccgcgtgtcatcaccagatacataaacgg
ctgatcaaggcggccggcgccacattgctggcaagggtggagaaccatcataattttgca
tggaaagaaatgtacgaaggacgggaagtgattgtgcatcggaaaggagccaccccggcc
ggtaaaggcgtattgggtgtgatccccggctctatgacggcacctggtttcattgtacgg
ggtaagggtgacgccgacagcctgcagtccgcatcccacggtgccggacgtacgatgtcg
cgtacacgggcaattgccaccatcaatcagcatgattggcagcagcaactggcagcgcat
ggtgtaacccttattggtggtgggttagatgaggctccggcagcgtataaagatatagaa
acggtgatggcagcacaggcaggcctggtagacgtactgggacgatttgcgccgaagata
gtacggatggctgatggcggtccggctgaagactaa
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