Chitinophaga sp. 180180018-2: UNH65_30965
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Entry
UNH65_30965 CDS
T11447
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
chii Chitinophaga sp. 180180018-2
Pathway
chii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UNH65_30965 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chii03400
]
UNH65_30965 (recD)
Enzymes [BR:
chii01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
UNH65_30965 (recD)
DNA repair and recombination proteins [BR:
chii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UNH65_30965 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
NAT10_TcmA_helicase
AAA_22
UvrD-helicase
RecD_N
Flavi_DEAD
SLFN-g3_helicase
nSTAND3
AAA_5
ResIII
AAA_16
PhoH
SRP54
AAA_29
AAA_28
NTPase_1
AAA
T2SSE
DUF3987
UvrD_C
AAA_24
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WTM48057
LinkDB
All DBs
Position
complement(7694256..7696061)
Genome browser
AA seq
601 aa
AA seq
DB search
MRNLSTLNDVHQQFAEYFDIPALKPYAYLLSKKGSEGHICLYLDKIAAEKDILPEIYQKI
DLNNDALGSIPLVGLQGNDKQPFVIYENRLYLQRYFRYESSFLRCIRQFLENEKALLAER
TALLQTQQSLIQRLFAGSTGNEADWQLAAAITGVLNNFTIITGGPGTGKTTTVAKILAIL
YATDPALKVALAAPTGKAAARMAESLRNTNVDADDAIIERFRGLQPATIHRLLKPAIGTP
YFRHRRDNPLNYDVVIVDECSMIDVALFSKLLDAIDPRTRIILLGDKDQLASVEAGSLFG
DLCQAQEHLNVFSPERRQFINHFISNISRQIPVSHERSNDSHPLFEHLVELRHSHRFTGN
TGIGKFSKAIINNDIPVISSFFPPLEDEQVVVDPSAAVTLFEDFIAGYAAFIREKDITTA
LKLLNARRVLTAVREGPAGLYAVNKQIEKYLFDKKLITAHTEFYENRPVILTRNYYEHGL
FNGDTGIIRPDENGVLMAWFEDSTGTLKAVLPGYLTQAETAFAMTIHKSQGSEFGEVLVL
LPNSADVPILTRELLYTAVSRARTKVYVQGSPEVILQAAGRFVERASGIASRFRETKTTA
N
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaatttatctacccttaatgatgtacatcagcagttcgccgagtatttcgatata
ccggcactgaaaccatatgcttacctgttatcaaagaaggggagtgaagggcatatatgc
ctttacctggataaaattgctgcagagaaagacatcctgccggaaatctatcagaaaatt
gatctcaataacgatgccctcggaagtattccgctggtaggcctgcagggcaacgacaaa
cagccgttcgttatttatgagaacagactatacctccagcggtatttcaggtatgaatct
tcttttctacgctgcattcgtcagttcctggaaaatgaaaaagcattgctggcggaaaga
acggcactgctgcaaacgcagcaatcgcttattcagcggctatttgcagggagcacaggc
aacgaagccgactggcagctggctgcggccattacgggtgtattgaataatttcaccatc
atcaccggcgggccgggaaccggcaaaaccactaccgtagctaaaatactggccatccta
tatgcaactgatccggcattgaaagtggcactggcggcgcctaccgggaaagctgccgcc
cgtatggcggaaagcctgcgcaacaccaatgtggatgcagatgatgccatcattgaaagg
ttcagggggctgcagcccgctaccatacaccgtttactgaaaccggctataggtacgccc
tacttccggcatcgcagagataacccattgaattatgatgtggtgattgtggatgagtgt
tctatgatagatgtagccttattctccaaactactcgacgctattgatccgcggacacgg
atcattctgctgggcgataaagatcagctggcctccgtggaagcaggcagcctctttggt
gatctttgccaggcgcaggaacatttgaatgtcttctccccggaaagacggcagtttatc
aatcactttatcagcaacatcagcaggcagatcccggtcagtcatgaacgctcaaacgat
tctcatccgttgtttgaacatctcgtggaattgcggcacagtcatcgtttcacgggaaac
accggcatcggaaaattcagcaaggctattatcaataacgatatccctgttatcagttcc
ttctttcctcctttggaagatgaacaggtagtggtagatccatctgctgcggtaaccctg
tttgaagattttatagcaggctacgctgctttcattcgtgaaaaagatatcaccaccgca
ctgaagctcctgaatgcccggcgtgtgctcactgctgtgagagaagggcctgctggtctt
tatgcagtgaataaacaaattgaaaaatatcttttcgataaaaaattgatcaccgcgcat
acggaattctatgaaaaccggccggtgatactcacccggaattactatgagcatgggctg
ttcaacggcgataccggtattatccggcccgatgaaaacggcgtgctcatggcctggttc
gaagacagtacaggaacgctgaaagccgtgctacccggataccttacacaggctgaaaca
gcctttgctatgactatccataaaagccagggatcggagttcggggaagtgctggtatta
cttcccaattcagcagatgttcctatcctgaccagggaactgttgtatacagcagtaagc
cgggccaggaccaaagtatatgtacaaggctctccggaggttatcctccaggcggcagga
cgttttgtggaaagagcttcgggaattgcatcgaggttcagagaaacaaaaacaacagca
aattaa
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