Chitinophaga sp. MD30: CK934_00500
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Entry
CK934_00500 CDS
T10354
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
chim Chitinophaga sp. MD30
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chim02000
]
CK934_00500
Transporters [BR:
chim02000
]
Other transporters
Pores ion channels [TC:
1
]
CK934_00500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
Plug
CarboxypepD_reg
EMC7_beta-sandw
PEGA
SpaA
Motif
Other DBs
NCBI-ProteinID:
ASZ09562
LinkDB
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Position
complement(187663..190110)
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AA seq
815 aa
AA seq
DB search
MHQLRTFLLLIMALLLQSPLWANSTDNAANSLSGKITDKTSGNALPGATVYLPDLHVGAS
SDAQGNYSIKHLPKGRFVVEIHYVGYAAQSEVVTIEGETTVNFTLSETLIEKNEVVVTGV
NLATSLKKNPAPISVIRKGALNEEISTNIIDAISKVPGVSQLTTGPAISKPFIRGLGANR
VVVVGDDIRQEGQQWGDEHGIEIDDYNVGKIEILKGPASLVYGSDALAGVVNIVPPSVVP
VGTVKGNVEANYQTNNGLIAYHADLAGNHNGFSWSVFGTQKFAHDYKNKYDNYVFNSRFR
NTNYGASIGINKQWGYSRLSYTSFNQHLGLVEGERDGQGRFVKPVNKNGQAEEEPVTSSD
NKDYSIGVPGQRINHDKLVWDNNIYLNNGGRLALTLGYQQNRRREYESPLTPDEPALYLK
LHTFNYNLRYFLPEMKGWQTTVGVNGMQQQNKISGKEFLIPAYNLFDAGVFAVTSKTFDK
LTLSGGLRYDYRKMKADPLFLNADEKPAPAGPDTEEKFAAFERNFSNVSGSVGLSYAASN
QVTLKLNVARGFRAPNIAELAANGVHEGTIKYEYGNADLKPETSTQIDAGVEFNSQHVSL
TANVFYNHISNFIYSRKLLNAAGTDSIPGNDNAEGYAAFKYQQNTANLYGGELLLDIHPH
PIDWLHFENTLSYVSATVSNATDSTKYLPNIPAGRWLSELKGKFKKVGGPFRNAYIGVQM
DMNFDQNNVFSAYQTETTTKGYTLFNAGLGADIVGRKDKTLFSLHFAVNNLGDVAYQNHL
SRLKYAPLNELTGRSGVFGMGRNFSVKVAVPIDFK
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaattgcgtaccttcttattattgataatggctttgctgttgcaaagcccgctt
tgggccaactccactgataatgctgctaactcactgagtggaaagataactgacaagaca
agcggtaacgctttgccgggagcgaccgtatatctgccggaccttcatgttggcgcttcc
tccgatgcccagggtaactattccatcaaacacttgcccaaaggccgtttcgtagtggaa
atccattacgtaggctacgcggctcaaagcgaagtcgtaaccattgaaggggagacaaca
gtcaacttcaccttgtccgaaacactgatcgaaaaaaatgaagtagtagtaactggtgtc
aacttggcaacttcattgaaaaagaatccggctcctatcagcgtcattcgcaaaggagcc
ctcaacgaagaaatatctaccaacatcatagacgcgatcagcaaagtgccgggcgtaagt
cagctgactaccggacctgctatctctaaaccgttcatccgcggcctcggcgctaaccgg
gtagtggttgtaggagatgatatccgccaggaaggccagcaatggggagatgaacatggt
atcgagatcgacgattataacgtcggcaaaatagaaatactgaaaggccccgcctcactg
gtatatgggtctgatgcattggccggagtagtaaacatcgtgccgccatccgtagtaccc
gtaggtactgtcaaagggaatgtagaagccaactatcagactaacaacggcctgatagcc
taccacgccgatctcgccggcaaccataatggcttcagctggagcgtattcggtacccag
aagttcgcacatgactataagaacaaatacgataactacgtattcaattcccgcttcaga
aatactaactatggcgcttctatcggtatcaataaacaatggggatattcccgcctcagc
tacacttccttcaatcagcaccttggcctggtagaaggcgaacgtgatgggcaaggccgt
ttcgtcaaaccggttaataagaacggccaggcagaagaagaacccgtaaccagcagcgac
aacaaagactacagcatcggcgtccccggacaacgtatcaatcacgataaactggtatgg
gataacaacatctacctgaacaatggtggtcgccttgctctcacattaggctatcaacag
aaccgccgccgcgaatacgaaagcccgcttacaccggatgaaccagcactatatctcaaa
ttgcacaccttcaactataacctgcgctacttcctgccggaaatgaaaggctggcaaaca
actgttggggtaaatgggatgcagcaacagaacaagatatccggtaaagaattcctcatt
ccggcatataacctgttcgatgcaggcgtattcgcagtgaccagcaaaactttcgataaa
ctgacattaagcggtggcctccgttacgactatcgtaaaatgaaggcagatccactcttc
ctcaatgccgatgaaaaaccagcacccgcaggccccgatacagaagagaaatttgcagct
ttcgaacgcaatttctccaacgtgtccggtagtgtaggccttagctatgccgccagcaat
caggtgacgcttaaactgaacgtcgccagaggcttccgtgcacccaatatcgcagaactg
gcggccaacggcgtccacgaaggcactatcaaatatgaatatggtaacgccgatctcaaa
ccggaaaccagcacacagatcgatgcaggcgttgaattcaactcccaacacgtgtcactg
accgccaacgtattctacaatcatatcagtaacttcatctactctcgtaaactgctgaat
gcagccggtacggactctatccccggaaatgataatgcagaaggatatgccgctttcaaa
taccagcaaaacactgctaacctctatgggggcgaactcttgctggatatccacccgcat
ccgatagactggctgcatttcgaaaatacactttcctacgtaagcgctactgtcagcaat
gcaacagactctaccaaatacctgcctaatattcctgccggccgctggctgtctgaactg
aaaggcaaattcaaaaaagtagggggtcccttccggaatgcctatatcggcgtacaaatg
gatatgaacttcgatcagaacaatgtattctccgcctatcagacagaaaccacgacaaaa
ggttacaccttgttcaatgccggattgggtgctgatattgtaggcagaaaagacaaaacg
ttgttctccttacatttcgcggtgaataacctgggagatgtagcttatcagaatcacctc
agccgcctgaaatatgccccgctgaacgaattgaccggtcgctccggtgtattcggtatg
ggacgcaacttcagtgtaaaagtggctgttccgatagatttcaaatag
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