Chitinophaga sp. MD30: CK934_00675
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Entry
CK934_00675 CDS
T10354
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
chim Chitinophaga sp. MD30
Pathway
chim00010
Glycolysis / Gluconeogenesis
chim00020
Citrate cycle (TCA cycle)
chim00260
Glycine, serine and threonine metabolism
chim00280
Valine, leucine and isoleucine degradation
chim00310
Lysine degradation
chim00380
Tryptophan metabolism
chim00620
Pyruvate metabolism
chim00630
Glyoxylate and dicarboxylate metabolism
chim00640
Propanoate metabolism
chim00670
One carbon pool by folate
chim00785
Lipoic acid metabolism
chim01100
Metabolic pathways
chim01110
Biosynthesis of secondary metabolites
chim01120
Microbial metabolism in diverse environments
chim01200
Carbon metabolism
chim01210
2-Oxocarboxylic acid metabolism
chim01240
Biosynthesis of cofactors
Module
chim_M00009
Citrate cycle (TCA cycle, Krebs cycle)
chim_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
chim_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
chim_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CK934_00675 (lpdA)
00020 Citrate cycle (TCA cycle)
CK934_00675 (lpdA)
00620 Pyruvate metabolism
CK934_00675 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
CK934_00675 (lpdA)
00640 Propanoate metabolism
CK934_00675 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CK934_00675 (lpdA)
00280 Valine, leucine and isoleucine degradation
CK934_00675 (lpdA)
00310 Lysine degradation
CK934_00675 (lpdA)
00380 Tryptophan metabolism
CK934_00675 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CK934_00675 (lpdA)
00670 One carbon pool by folate
CK934_00675 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chim04147
]
CK934_00675 (lpdA)
Enzymes [BR:
chim01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
CK934_00675 (lpdA)
Exosome [BR:
chim04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
CK934_00675 (lpdA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
FAD_binding_2
Pyr_redox_3
GIDA
NAD_binding_8
HI0933_like
FAD_binding_3
DAO
3HCDH_N
Lys_Orn_oxgnase
Thi4
AlaDh_PNT_C
UDPG_MGDP_dh_N
WcbI
MC_hydratase
DHQ_synthase
Motif
Other DBs
NCBI-ProteinID:
ASZ09593
UniProt:
A0A249SPQ6
LinkDB
All DBs
Position
complement(228896..230296)
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AA seq
466 aa
AA seq
DB search
MGKYDVTIIGSGPGGYVCAIRCAQLGLKTALVEKYDALGGTCLNVGCIPSKAVLESSEHY
YNAKSKFVMHGIHLENLQINLQEMIAHKADVVKKTGDGVKYLMKKNKVDVFYGTGSFINP
TKILVKSNDGNQTELETVHTVIATGSKPASLPNVTIDKQHIISSTEALVLAEVPKHLIVI
GGGVIGMELGSVYARIGSKVTVIEYYEQILATMDKSLGKELQKSLSKLGFTFHFNHKVTG
AEMQGQNIIVTAENKNGEQVKFEGDYCLMAIGRKPYTAGLNMEAIGVSTEKGKINVDENF
RTDVSNVYAIGDVIRGAMLAHKASEEGVYVAEYIANLRPHINYLTIPNIVYTWPEVASVG
HTEEELIANGVDYKSGSFPLMANARARMNADTEGFIKVLAHSQTGEILGIHMIGPRIADI
IGEAALAMQHGISALGVSNVVHGHPTFYESLKEACLNATGKGAIHI
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatatgatgtgactattatcggctccggacctggaggctatgtctgcgctatt
cgctgtgcccaattaggcttaaagacagccttagttgaaaaatatgacgctcttggtggc
acgtgcctgaatgtaggctgcattccatcgaaagctgtacttgaaagcagtgagcattac
tacaacgccaaaagcaaatttgtaatgcacggcattcatttggaaaatcttcagatcaac
ctgcaggaaatgattgcccacaaggctgatgtagtgaagaaaacaggagatggtgtaaaa
tatttaatgaaaaaaaacaaagtggatgtgttttatggtacaggatcatttatcaatcca
acaaagattttagtgaaatcaaatgacggtaatcaaacagaattagagacagtccatacc
gtcattgccaccggttccaaacctgcatcccttcctaatgtaactatagacaaacaacat
attatctcttctaccgaagcattggtattagcagaggttcccaagcatttgattgttatt
ggtggtggcgtcattgggatggagttaggttcggtgtatgctcgaattggttcaaaagta
acagtgattgaatattatgagcaaattcttgcgacaatggacaaatctctcggaaaggaa
ctacaaaaatcactttcaaaactggggtttacatttcatttcaatcacaaggttaccggc
gctgaaatgcaaggccagaatattatagtaactgccgaaaacaaaaatggagaacaggtg
aagtttgaaggtgattattgcttaatggcaattggacgaaaaccttatactgccggactt
aacatggaggcaatcggtgtttcaacggagaaaggaaaaattaacgttgatgaaaacttc
agaacagatgtttccaatgtttatgcaatcggcgatgtgattaggggtgctatgcttgca
cacaaagcttccgaagaaggtgtatatgtagctgagtatattgcaaacttgcgtccgcat
atcaattatctgaccattccaaacatcgtttacacctggcccgaagttgccagcgtaggg
catacagaagaagaattgattgcaaatggcgtagattataaatccggctcatttccgtta
atggctaatgcccgtgcccgcatgaatgcagatactgaaggattcataaaagtcttggcg
catagccagactggtgaaattctgggcatacacatgataggtccccgaattgccgatatc
attggcgaagcggcacttgccatgcaacatggtatttctgctttgggagtttccaatgta
gttcatggtcatcccactttttatgaaagtctgaaagaagcctgtttaaatgcaacaggg
aaaggagctattcatatttga
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