Chitinophaga sp. MD30: CK934_01210
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Entry
CK934_01210 CDS
T10354
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
chim Chitinophaga sp. MD30
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chim03009
]
CK934_01210
Enzymes [BR:
chim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
CK934_01210
Ribosome biogenesis [BR:
chim03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CK934_01210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF8666
Motif
Other DBs
NCBI-ProteinID:
ASZ09688
LinkDB
All DBs
Position
351334..351939
Genome browser
AA seq
201 aa
AA seq
DB search
MNHSAHRYFAIHKPYDMVSQFVSSVNVPLLGELDFDFPEGTHAIGRLDINSEGLLLLTTN
KKVTQLLFQGNVPHDRTYLVMVKDIVSTESLEHLRNGVRIRIKGGSYYTTPPCKVMIAQA
PHTLWPLPIPHRTDIPHTWLLITLTEGKFHQVRKMVAAVKHKCQRLIRISIEDLQLGDLP
PGGVREMDEATFFQQLRITDY
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactcagcgcatcggtactttgccatacacaagccctacgatatggtatcccaa
tttgtaagctcagtaaatgttccgctgctgggagaattagacttcgacttccccgaaggc
acacatgccataggacgcctcgacatcaattcagaaggcttgctgctgttgacaaccaac
aaaaaagtaacgcaactactgtttcaaggtaatgtaccacacgacagaacttacctcgtt
atggtaaaagatatcgtaagcacggaaagcctggaacacttacgcaatggtgtacgtatc
cgcatcaaaggcggtagctattacaccaccccaccttgcaaggtaatgatcgcacaagcc
ccccatacactatggccactacctatcccacacaggaccgatatcccgcatacctggctg
ctcatcaccttaacagaaggcaagttccaccaggtacgtaaaatggtagctgccgtcaaa
cacaaatgccaacggctgatacgcatatccatagaagatctccaactgggcgacctgcct
cccggcggcgtaagggaaatggatgaagcaaccttcttccaacaactgaggatcacagat
tattaa
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