Chitinophaga sp. MD30: CK934_01230
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Entry
CK934_01230 CDS
T10354
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
chim Chitinophaga sp. MD30
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chim02000
]
CK934_01230
Transporters [BR:
chim02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CK934_01230
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_6
MAAL_C
Motif
Other DBs
NCBI-ProteinID:
ASZ09691
UniProt:
A0A249SQD5
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Position
357992..359797
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AA seq
601 aa
AA seq
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MRKHIITFSLFITAAFAGCRKDPKQVLRTDVYSSADYPSTLPNLFSTLVPAYSNLRSEDL
LGFQLLCKTFAGSEHVAELTYGGDLSWTEITVNNMSTSNSYANQLWVGLYRGIKNVNLFL
DRAEFYKKNYASPDELKQVERMTGEAYFLRALYYFYLESFFGESYLSTAGGGDKMGVPII
TKLPDGLGAMQVKRNTVKEVWDFIIKDLQQSATLLKGVQWSAGDKGRVTEWAPKALLGKV
YVFTQDWANAKTTLQDVINNSGKSLMPFVKYAAAFNGIDANEFNEESLFEINVDRNSNGG
YGIFDFRINLTTSQGLIWSPCILGDNGTEQDGKGLGYCNEFFNDKNLQRFGFNLPIYTLK
DNPAFDQSKPETWQNPKQVLDPAYRQQSQAVRTNKTADPRLFISAPQPWLDSGSNDGVNW
RPICKFIALNAAQKPIYHGWSLKKFVTYDNSIFNRQAAADAANYYLLRLADIYLLYAEAA
VNTGDNATALAYINQVKRRAYDYPVDVPSPVDYKTPSDKTNASDPVLANNPLRYERWAEL
FGEGHWWFDVCRWRIGSQEATYYANSLAGGPIKWLDSKSYIWPIPVNEINTNTQMRQNPG
Y
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaacatattataaccttttctttatttatcactgctgcatttgcgggttgccgt
aaagaccccaagcaggtactccgtacagatgtgtacagcagtgccgattatccctctacc
ttacccaatctcttcagcacgctggtccccgcttattccaacctgcgttccgaagacctg
ttaggcttccagctactatgtaagaccttcgccggttcagaacacgtagcagaactgacc
tacggcggcgacctctcctggacagagatcacggtcaataacatgagcacttccaacagc
tacgccaaccagctatgggtaggtctgtacaggggtatcaaaaacgtaaacctcttcctc
gaccgcgcagaattctacaaaaagaactatgcctcccctgatgagctgaaacaggtagaa
cgcatgaccggtgaggcctatttcctacgcgcactctactacttctacctggagagcttc
tttggtgaaagctacctgagcaccgctggcggtggcgacaagatgggggtacctatcatt
actaaactccccgacggattaggcgctatgcaggtaaaacgtaacaccgtaaaagaagta
tgggacttcatcatcaaagatctccaacaatccgccaccttgctcaaaggtgtacagtgg
agcgcaggcgataaaggacgcgtcaccgagtgggcgcccaaagccttattgggaaaggtg
tatgtattcacccaggattgggccaatgcaaagaccaccttacaggacgtgatcaacaac
agcggaaagtcgctgatgcccttcgtcaaatatgccgcagcattcaatggcatcgatgcc
aacgaattcaatgaagaatccttgttcgagatcaacgtggaccgtaactccaacggtggc
tacggcatcttcgatttcaggatcaacctcaccaccagccagggtctcatatggtcgccc
tgtatactgggagataatggcacagagcaggatggcaaaggcctcggctattgcaatgaa
ttcttcaacgataaaaatctgcaacgattcggattcaacctgcctatctatacgctgaaa
gacaatccagcctttgatcagagcaaacccgaaacctggcagaatcccaaacaggtactg
gacccggcataccggcaacagtcacaggccgtacgtaccaacaagaccgccgatccgcgc
ttattcatctccgccccgcagccctggctggatagtggcagcaacgatggtgtcaactgg
cgtcccatctgtaagttcatcgcgctcaacgcagcgcagaagcccatctaccacggatgg
agcctgaagaaattcgtgacctatgacaactccatcttcaaccggcaagcggcagcagat
gcagccaactactacctgctacgcttggcagatatctacctgctatacgcagaagcagcc
gtcaataccggcgacaacgctaccgcactggcatatattaaccaagtaaaacgccgcgct
tacgactaccccgtagatgtaccttcgccggtagattataaaacaccgtcggataagact
aacgccagcgatcccgtactggctaataatccgctgcgctatgaacgttgggcagaattg
ttcggagaaggacattggtggttcgatgtatgccgctggcgtataggcagtcaggaagct
acttattatgctaattccctggcaggcggaccgatcaaatggctggacagcaaatcctat
atctggcccataccggtcaatgagatcaatacaaacacacaaatgcgacaaaacccggga
tattaa
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