Chitinophaga sp. MD30: CK934_03455
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Entry
CK934_03455 CDS
T10354
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
chim Chitinophaga sp. MD30
Pathway
chim00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CK934_03455 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
chim01007
]
CK934_03455 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chim03016
]
CK934_03455 (lysS)
Enzymes [BR:
chim01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CK934_03455 (lysS)
Amino acid related enzymes [BR:
chim01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CK934_03455 (lysS)
Transfer RNA biogenesis [BR:
chim03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CK934_03455 (lysS)
Prokaryotic type
Other AARSs
CK934_03455 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ASZ10101
UniProt:
A0A249SRK3
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All DBs
Position
915288..916796
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AA seq
502 aa
AA seq
DB search
MTQLSEQEIIRREKLQELHKLGIDPYPAAEYPVNDTSLNILTNYSEETKEQFQEVCLAGR
IMANRDMGKAAFAKIQDKAGRIQVYVRRDDICPGEDKTLYDIVWKKLIDLGDIIGVKGYA
FVTKTGETSIHAKEITILSKSLRPLPVVKEKEGETFDAVIDPEFKYRQRYADLIINPDVK
DVFMKRTRIMQTIRDFYNNLGFLEVETPILQAIPGGATARPFVTHHNALDIPLYLRIANE
LYLKRLIVGGFDGVYEFAKDFRNEGMDRTHNPEFTVMEMYVAYKDYEWMMRTTESLLEKV
AIALHGGTDVQVGENTISFKAPFKRVTMYDAIKEHTGIDISGMDEAQLRDVCKQLNIHVE
ANVGKGKLVDEIFGEQCEGHYIQPTFITDYPIEMSPLTKKHRSKAGLVERFELMVNGKEI
ANAYTELNDPIDQRERFEEQVKLMERGDDEAMFIDYDFLRALEYGMPPTSGIGIGIDRLT
MMMTNQPSIQDVLFFPQMRPEK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgacacaattatctgaacaggagattatacgccgggagaaactgcaggaactacacaaa
ctggggatagacccttatcctgcggcggaatatccggtgaatgacacttcgctgaatatt
ttaacgaactattcagaggagaccaaggagcaattccaggaggtatgcctggctggcagg
atcatggcgaaccgcgacatgggtaaggccgcctttgcgaagatacaggataaggcgggg
cgtatacaggtgtatgttcgccgcgatgatatctgtccgggagaggataagaccctgtac
gatattgtatggaagaagctgattgacctgggagatattatcggggtgaagggttatgca
tttgttacgaagacgggcgagacctccattcatgcaaaggagattacaatattatccaag
tcactgcgtccgttgccggtggtgaaagagaaagagggagagacttttgatgcggtgata
gatcctgagttcaaataccgccagcggtatgcggacctcatcatcaacccggatgtgaag
gatgtgtttatgaagcgtacacgcattatgcagacgatccgtgatttttataacaacctg
ggattcctggaggtagagacccctattcttcaggcgatacctggtggtgcaactgcacgt
ccgtttgtgacgcaccataatgccttggatattcctttgtacctgcgtattgccaatgag
ttgtacctgaaacgcctgatagtaggaggctttgatggcgtgtatgagttcgccaaagac
ttccgtaacgagggtatggaccgtacgcacaatccggaattcaccgtgatggagatgtac
gtcgcctacaaggactatgagtggatgatgcgtacaacggaaagtttactggaaaaggta
gctattgccttacacggtggtaccgatgtacaggtaggagaaaatacgatcagtttcaaa
gcgcccttcaagcgggtgacgatgtacgatgcgatcaaagagcatacaggcattgacatt
tccggtatggatgaagcacagctgcgtgatgtgtgcaagcaactcaacatacatgtggag
gccaacgtcggcaaaggcaagttggtagacgaaatattcggcgagcaatgtgaagggcat
tatatacagccgacctttatcaccgattatccgatcgagatgagcccgctgaccaagaaa
caccgcagcaaggcggggctggtagaacgctttgagttgatggtcaacggtaaagagatc
gccaatgcttatacggagctgaatgatccgatcgatcagcgggagcgttttgaggagcag
gtgaaactgatggagcgtggggatgacgaagcgatgtttatcgactatgacttcttacgt
gcactggaatatggtatgccgccgacatccggtattggcatcggtattgaccgcctgacc
atgatgatgacgaaccagccttctatacaggatgtgctgttcttccctcagatgagacct
gagaaataa
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