Chitinophaga sp. MD30: CK934_03995 Help Entry CK934_03995       CDS       T10354                                  Name (GenBank) RNA polymerase sigma-70 factor   KO K23514   RNA polymerase sigma-19 factor, ECF subfamily Organism chim  Chitinophaga sp. MD30 Pathway chim02020   Two-component system Brite KEGG Orthology (KO) [BR:chim00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     CK934_03995  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:chim03021]     CK934_03995 Transcription machinery [BR:chim03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      CK934_03995 SSDB OrthologParalogGFIT Motif Pfam:  Sigma70_r4_2 Sigma70_r4 Sigma70_r2 Sigma70_ECF GerE HTH_23 HTH_11 HTH_24 Phage_CP76 HTH_10 HTH_7 MarR_2 MarR HTH_29 HTH_40 HTH_65 DUF3489 HTH_Tnp_ISL3 PF0610-like_N HTH_20 Cas_TM1802 SpoIIID HTH_DeoR HVO_A0114 HTH_9 DUF722 Motif Other DBs NCBI-ProteinID:  ASZ10200 LinkDB All DBs Position 1056792..1057394 Genome browser AA seq 200 aa AA seqDB search MQDYSDLDLWGLIRQGDTAAFGVLYERKWETLYHTVYWRVLSQEDTQDILHDIFCRFWEK RQQINITDTVDGYFRTAARFSVLNHLRAKGLRERHMQLSSLTTQEQSDSTTALTHAQELK RLYEEQVNLLPEKMKVIYLLSREEHQTIEAIAKRLSISPQTVKNQVSSALKKIRAGLAGY EFFVLLTGDIKLLQVFFEMF NT seq 603 nt NT seq  +upstreamnt  +downstreamnt atgcaagactattcggaccttgacctttggggattgatcagacagggggacactgctgct tttggggtactttatgagcgaaaatgggagacgctttatcacacggtttactggcgtgta cttagccaggaagatacacaggacattcttcatgacattttttgccgattttgggaaaaa cggcaacagatcaacattacagatactgtagacggttatttccggaccgctgcgagattc agtgtactaaaccacttacgtgccaagggattacgggagcgccatatgcagctatcttcg ttgacgacacaagagcagagcgacagcactacggcgctgacgcatgcacaagaattaaag cgtttgtacgaggagcaggttaacctactgccggagaagatgaaagttatataccttttg agccgggaagagcatcagacgatagaagcaatagcgaaacggctgtctatttcgcctcaa acggttaaaaaccaggttagcagcgcccttaaaaagatccgcgccgggctggccggatat gagttttttgttcttttaaccggggatataaagctactgcaagttttttttgaaatgttc tag

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