Chitinophaga sp. MD30: CK934_04155
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Entry
CK934_04155 CDS
T10354
Name
(GenBank) helicase SNF2
Organism
chim Chitinophaga sp. MD30
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SNF2_assoc
ResIII
DEAD
ERCC3_RAD25_C
SWIM
Motif
Other DBs
NCBI-ProteinID:
ASZ10228
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Position
complement(1094661..1098395)
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AA seq
1244 aa
AA seq
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MSLPQLLKYVYNNGTDEVIRRGKRIYSTGGAELLEADPVLKSATFRVKSDTHANYYRVSI
SKYHDTPNMSIRCQCPYNLGDICRHEAAALFQLQEMLDKNHFESFETNYDQQHTLIKMKS
IDIKSLKLLASPAIFAAAEVIAKRHPAEIKYAKDEKVEAEMKVDGETYPLIIQRNEERNF
DTHCICDEKDHALCKHKTALFLQLLEKHGPFYFDSLRNWDKEKNKLLSSYGYSLSDDLDG
KFAFSYMEGKPYLRVLDPTIKRVDPTNNGRTPAPPPPVETVTVTQRLGVVFNANEPLFPY
FKIELVSGEANDEQDNFVSLVSKLDLSKYVDFYQYRESDRELISPIRKLQSAEVSKFLSK
NSPFAGIWENITHENAEELPTETKELMLEYLHPKLVKLFQMIAAHGLLFLLPNRQPFKSK
NILPVQLAADRLKLIFKTHAEGQHVEISCFVAVEGEEISVSANEWDSSLLFLHNGMLHLF
ENPQDALHVELFRANGKVRIPQSEWGTYLKDYLLPLGKNYDIQFDRALQAEVVNIKPECR
VYLKEMGETFIVQPGFAYYGQEVEWNDDGKITVQEGNKVLVIQRNKAAEEEFVEKIRSLH
TNFSLPGNTNNYFYLRSKEALKNNWFFLFFDALKEMNVRVFGFDGLRNFKFSSHKPVTNL
QISSGIDWFDAQVEVLYGDQRVSIKEIKHALANKQNYVQLADGSLGLLPEEWLKKYSLLF
KIGEEKDKGLKLSKYNFSVIDELFEFIDDEAIVIELEQKRKKLLQFDEIRNISLPEHVNA
QLRPYQESGYQWLNYLDEVKWGGILADDMGLGKTIQALTFIQHYKNKNGGKCMTLVVCPT
TLIYNWENEIRKFTPTIRHHIHHGPARTKNVEELQQFDVMITTYGTLRSDIQMLMKIEFD
YVVLDESQAIKNPQSKVTKAAQLLHTKNRIALSGTPMQNNTFDIYAQMNFLNPGMLGSVD
FFRNEFATPIDKFQDEERKEHLRKLIYPFILRRTKEQVAKELPEKIETVIFCEMDAEQRH
IYDAYRNSYRSKILGVIEDQGMERSQLTILQGLMKLRQICDSPAILNETEKYPNHSVKLH
ELTREISENISNHKTLVFSQFLGMLGLIKERLQHLKIPFEYFDGSTSTMERERAIQNFQN
NDECRVFLISLKAGGVGLNLTAADYVYIVDPWWNPAVEQQAIDRTHRIGQTKNIFAYRMI
CKDTVEEKILQLQERKKSLVKDIIADDTGFVKKLTKEDVLYLFS
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgccccagttgctcaaatatgtttataataacggtaccgatgaggtgatccgc
cgggggaagcgtatctattctactggcggcgcggaattactggaggctgatccggtactg
aagtcggctaccttccgggtgaaaagtgatacccatgccaactactaccgggtttccatc
agcaaataccacgacactcccaacatgtctatacggtgccagtgcccgtataacctgggc
gatatctgccgtcatgaggcggcggcgttgttccagctacaggagatgttggataaaaat
cattttgagagtttcgaaaccaattatgatcagcagcacacgctgatcaagatgaagtct
attgatataaaaagcctgaagctgctggcgtctccggcgatctttgccgcggcggaggtg
attgccaaacgtcatccggcggagatcaaatatgccaaggatgagaaggtagaggccgaa
atgaaggtagatggcgaaacctatccccttatcatccagcggaacgaagagcgtaatttt
gacacgcactgtatctgtgatgagaaggatcatgccttatgtaaacacaagacagccctg
ttcctgcaactgctggagaaacatgggccgttctattttgattcactgcgcaactgggac
aaagaaaaaaataaactattgtcgtcttatggttattccctgagcgacgacctggatggt
aagtttgccttttcctatatggagggtaagccctatctgcgggtattggaccctactatc
aagcgggtagaccctactaacaatggccgtacgccggcgcccccacccccggtcgagact
gttacggtcacccagcgcctgggagtggtattcaacgccaacgagccgttatttccttac
ttcaagatcgagctggtcagcggagaagccaacgacgagcaggacaactttgtgtcgctg
gtcagcaaactggatctctctaagtacgtcgatttctatcaataccgggagtctgaccgg
gaactgatctctccaatccggaaactacaatccgcggaggtgagcaagttcctgagtaag
aactctccttttgccggtatttgggaaaacatcacgcatgaaaatgcggaggagctgcct
actgagaccaaagagctgatgctggaatacctgcatcctaagttggtaaagttgttccag
atgatcgcggctcacgggttgttgttcctgctgcctaaccggcaaccgttcaagtctaaa
aatatcttgccggtacaactggcggccgatcggctgaaactgatctttaaaacgcatgcc
gaagggcagcacgtggagatcagttgttttgttgccgtagaaggggaagagatcagcgtg
tctgccaacgaatgggacagctcgttgctgttcctgcacaatggtatgttgcatcttttt
gagaacccacaggatgcattgcatgtggagttgttccgcgccaatggcaaagtgcgcatc
ccgcagtccgaatggggtacttacctgaaggactatctgctgccgctgggcaagaactac
gatattcaattcgaccgcgccttacaggcggaagtagtcaatataaaaccggagtgccgg
gtctatcttaaagagatgggtgagactttcatcgttcagccaggttttgcttattacggg
caggaagtggagtggaatgacgacggtaagatcacggtgcaggaagggaataaggtgctg
gttatccaacgtaataaagccgcggaagaagagtttgtagagaagatccgttccctgcat
accaatttctctctgcccggcaatacgaacaactacttctatctgcgttccaaggaagcg
ttgaagaacaactggtttttcctcttctttgatgcgttgaaagagatgaatgtgcgggtg
ttcggtttcgacggtctgcgcaacttcaagttcagctctcataagccggtgaccaacctg
cagatcagctccggtatcgactggttcgatgcccaggtagaggtgttgtatggcgatcag
cgggtgagcatcaaagagatcaaacatgcgttggccaataagcagaactatgtgcaactg
gcagatggttcccttggtttgctgccggaagagtggctgaagaagtactccctgctgttc
aagatcggtgaggaaaaagacaaagggcttaaactcagtaagtataacttcagcgtgatc
gatgagctatttgagttcatcgacgatgaagcgatcgtgatagagctggagcagaagcgt
aagaagctgttgcagtttgacgagatacggaatatctccttaccggagcatgtcaatgcg
cagctgcgtccttaccaggagagcggttaccagtggctgaactatcttgatgaagtgaaa
tggggaggtatcctggctgacgacatgggtcttggtaagacgatacaggcccttactttc
attcagcactacaagaacaagaatggtggtaaatgtatgacgctggtggtatgtccgact
accctgatctacaactgggagaatgagatccgcaagttcacccccactataagacatcat
attcatcacggtcctgcacgtaccaaaaatgtggaggagttgcagcagttcgacgtgatg
atcaccacctacggtactttgcgcagtgatatccagatgttgatgaagatagagttcgac
tatgtggtactggatgaatcgcaggcgatcaagaatccgcagagtaaggtgacaaaagcg
gcacagctgttgcacaccaaaaacaggattgcgctgagtggtacgccgatgcagaacaat
acgttcgacatctacgcgcagatgaacttcctgaacccgggtatgttgggtagtgtggat
ttcttccgtaatgaatttgccacgcccatagataaattccaggatgaggagcggaaagag
catctgcgtaagctgatctatcctttcatcctgcgtcgtactaaagagcaggtagccaaa
gagctgccggagaagatcgaaacggtgatcttctgtgagatggatgcggagcagcgtcat
atttacgatgcataccgtaactcttaccggtccaagatactgggtgtgatagaagatcag
ggtatggagcgttcacagctgactattttgcaaggtctgatgaagttgcggcagatatgt
gattccccggctatcctcaatgagacggagaaatatccaaatcactcggtaaagctgcat
gagctgacccgtgagatatctgaaaatatcagcaatcacaagacactggtgttctcccag
ttcctgggtatgctgggattgatcaaagagcgtttgcaacacctgaagataccatttgaa
tattttgacggtagcacgtctacgatggaacgtgaaagggcgatccagaacttccagaat
aatgacgagtgccgggtgtttctcatctctctgaaggcgggtggtgtgggtcttaacctc
actgctgccgactatgtgtacattgtagatccctggtggaaccccgctgtggagcagcag
gcgatcgaccgtacgcaccgtatcgggcaaacgaaaaatatcttcgcttaccgtatgatc
tgtaaggatacggtagaagagaagatattgcagttgcaggagcgtaagaagtcgctggta
aaagatatcattgcagacgatactggttttgtgaagaaactgaccaaagaagatgtactg
tacctgttcagctaa
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