Chitinophaga sp. MD30: CK934_04660
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Entry
CK934_04660 CDS
T10354
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
chim Chitinophaga sp. MD30
Pathway
chim03030
DNA replication
chim03410
Base excision repair
chim03420
Nucleotide excision repair
chim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CK934_04660
03410 Base excision repair
CK934_04660
03420 Nucleotide excision repair
CK934_04660
03440 Homologous recombination
CK934_04660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chim03032
]
CK934_04660
03400 DNA repair and recombination proteins [BR:
chim03400
]
CK934_04660
Enzymes [BR:
chim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CK934_04660
DNA replication proteins [BR:
chim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CK934_04660
DNA repair and recombination proteins [BR:
chim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CK934_04660
NER (nucleotide excision repair)
GGR (global genome repair) factors
CK934_04660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ASZ10322
LinkDB
All DBs
Position
1211237..1214059
Genome browser
AA seq
940 aa
AA seq
DB search
MQKKLFLLDAMALIYRAYYALIRNPRLTTTGRNTNAQFGFTTTLLDLINKEKPTHMAVAF
DTHAPTERHTSFVDYKANREDAPEDLLDALPDIKRIIEGFNIPVVELDGYEADDVIGTLA
WQAAASGYTVFMVTPDKDYGQLVKDNVFIWKPPYMGSKEEVLGPKEVCEKWQIKDVHQVI
DILGLMGDAVDNIPGIAGVGEKTAMKLLAQYGSLENILANADNIGGKMGEKIKAGHENAV
LSKQLATIITNVPVTFHEEDFCLKEPNKEKLTEIFTELEFKSLGKRVLGDNFGGQADTAA
KGRAQQTDLFGNTVDTPASATVAPAAEEEGLNVLMADKNIDNTPHNYQLIDSPEKRKALL
TLLQQYDEVSFDTETTGTDANAVEIVGMSFSVIKGEGYYIPMPPDWEAARAILEEFRPLF
ENEKIMFIGQNIKYDMIVLKWYGLEIPGRVFDTMLAHYLIEPEGRRSMDMLSAQYLQYAP
VSIETLIGKKGKGQGTMRDVEIEKIKDYAAEDADITLQLKEKFEPMLPQKAVEKVFYEVE
NPLVQVLTHMEYEGIRIDTQTLSDYSRELDTEIRRAEESVYEQAGVRFKLASPKQLGEVL
FEKLQLDPKAKKTRTGQYATGEDVLQKLANKHKIVDDILIFRELSKLKSTYVDALPLMIN
PRTNRVHTSYNQAVAVTGRLSSNNPNLQNIPIRTDRGREVRKAFVPRSEEFTLLSADYSQ
IELRIIAAISEDAGMSSAFRDGVDIHTATAAKVYGIDIADVTSDMRRNAKSVNFGIIYGV
SAFGLSENLGIARGEAKTLIDNYFTQYPAIRDYMDNQIQSAQKKGYVETLLGRKRWLKDI
NSSNAVVRGYAERNAINMPIQGTAADMIKLAMIAVHKTFKAHNLRSRMILQVHDELVFDA
HVDEVEIIKPLIRDAMKNALPLSVPVEVEIGTGKNWLEAH
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaaactatttttactggatgcaatggcattgatttatcgtgcctactatgca
ttgataaggaatccccggcttaccaccaccggtcgtaataccaacgcccagtttggtttt
accaccactttactggatcttatcaacaaagagaaacctacccacatggcagtggcgttc
gatacgcatgcccccacagaaagacatacttcattcgttgactataaagccaaccgggaa
gacgctcccgaagacctgctcgatgctttgcctgatatcaaacgcatcatcgaaggcttc
aacatccctgttgtagaattagatggctatgaagcagatgacgtgatcggcaccctcgcc
tggcaggccgccgccagcggatataccgtattcatggtcacccctgataaagactacgga
cagctggtaaaagacaatgtattcatctggaagcccccctatatgggctctaaagaggaa
gtcctcggtcccaaggaggtatgtgaaaaatggcagatcaaagatgtccaccaggtgatc
gatatccttggccttatgggcgatgcggtagacaacatcccgggtatcgccggggtagga
gaaaagaccgccatgaaactactggcacaatatggctccctggaaaacatactggccaat
gcagataacatcggcggtaaaatgggcgaaaagatcaaagccggccatgaaaatgccgtc
ctgtccaaacaactggcgactatcatcactaatgtgccagtgaccttccatgaagaagat
ttctgcctcaaagaacccaacaaggaaaaactgacagagatcttcaccgaactcgaattt
aagtcgctgggcaaacgtgtactgggtgataatttcggaggtcaagccgatactgccgca
aaaggccgcgcacaacaaacggaccttttcggcaacacagtagatacgcctgcctctgct
acggtagcccccgctgctgaagaagagggcctgaatgttctcatggccgataaaaatatc
gacaatacgccgcacaactaccagctcatcgattccccggagaaacgaaaagcattactg
accctgctgcagcaatacgacgaagtatccttcgataccgaaactaccggtaccgatgcc
aatgcggtggagatcgtcggcatgagcttctccgttataaaaggagagggctattatatc
cccatgccgcccgactgggaagctgccagggctatcctcgaagagttcagacctcttttc
gaaaacgaaaagatcatgttcatcggccagaacatcaagtatgatatgatcgtactcaag
tggtatggccttgaaataccgggcagagtattcgacaccatgctcgcacattatctcatc
gaacccgaaggccgccgcagcatggatatgctgagcgcccaatacctgcaatatgccccc
gtttccatagaaacgctaatcggcaaaaaaggcaaaggccagggtactatgcgcgatgta
gagatcgaaaagatcaaagactacgcggctgaagatgcagatattaccttgcagctgaag
gaaaagttcgagccgatgttgccgcagaaggcggtagagaaagtattctacgaagtggaa
aatccgctggtacaggtactcactcatatggaatatgaaggcatccgtatcgatacgcag
acactgtccgactattcccgcgagctggataccgagatccgtcgtgcagaagaaagtgtg
tatgaacaggctggtgtacgttttaagttagcgtcccccaaacaattgggtgaggtgctg
ttcgaaaaattacagctggaccctaaagccaaaaaaacacgtaccgggcaatatgctacc
ggtgaagatgtactccagaagctggccaacaaacacaagatcgtcgatgacatcctgata
ttccgggaactgagcaagctgaaatctacctatgtagatgccttaccgctcatgatcaat
ccacgtaccaacagggtgcatacttcctataatcaggccgtggcggtgacgggccggctc
agctccaacaacccgaacctccagaacattcctatccgcaccgatagaggtagagaggta
cgtaaggctttcgtgccgcgtagtgaggaatttaccttactctccgccgactattcccag
atagagttacgtatcatcgccgccatcagtgaagatgccgggatgagcagcgctttccgg
gatggcgtagatatccataccgctactgcagccaaagtgtatggcatagacatcgccgac
gtcacctccgatatgcgccgtaacgccaaaagcgtcaacttcggtatcatatacggtgtg
agtgcttttggcctctctgaaaacctgggcatcgccaggggagaagccaaaacgctgatc
gacaactacttcacacagtatccggctatccgtgactatatggacaaccaaatacagtcg
gcacagaagaagggttatgtcgagaccctcctgggacgtaaacgctggctgaaagatatc
aactcttccaatgcagtcgttcgcggttatgccgaacgaaatgccatcaacatgccgata
caaggtactgcagccgacatgatcaaactggcgatgatcgctgtacacaaaacctttaaa
gcacacaacctgcgcagccgtatgatcctacaggtacatgatgaattggtattcgatgca
catgtcgacgaagtagagatcatcaaaccgttgatacgtgatgccatgaagaacgcactt
cccctgtctgtacctgtggaagtggagatcgggaccggtaaaaactggctcgaagcacac
taa
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