KEGG   Chitinophaga sp. MD30: CK934_05685
Entry
CK934_05685       CDS       T10354                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
chim  Chitinophaga sp. MD30
Brite
KEGG Orthology (KO) [BR:chim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:chim03032]
    CK934_05685
   03036 Chromosome and associated proteins [BR:chim03036]
    CK934_05685
   03400 DNA repair and recombination proteins [BR:chim03400]
    CK934_05685
DNA replication proteins [BR:chim03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CK934_05685
Chromosome and associated proteins [BR:chim03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CK934_05685
DNA repair and recombination proteins [BR:chim03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CK934_05685
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1 HU-DNA_bdg TFIIA_gamma_N
Other DBs
NCBI-ProteinID: ASZ10500
UniProt: A0A249SS82
LinkDB
Position
complement(1464546..1464815)
AA seq 89 aa
MNKAELIDKLAKDAGITKTQANEALDSFTKAVADTLKKGGKVTLVGFGTFSVSKRAARNG
RNPQTGQIIKIKAKKVAKFKAGKALSDKL
NT seq 270 nt   +upstreamnt  +downstreamnt
atgaacaaagccgaattaatcgacaagctggctaaagatgccggtatcactaaaacccaa
gctaacgaagctctggattcttttactaaagctgttgctgataccctgaagaaaggtggt
aaagtaacactggtaggtttcggtactttctctgtatctaaacgtgctgctcgtaacggt
agaaatcctcagactggccagatcatcaagatcaaagctaagaaagttgctaagttcaaa
gctggtaaagctttatctgacaagctctaa

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