Chitinophaga sp. MD30: CK934_08050
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Entry
CK934_08050 CDS
T10354
Name
(GenBank) permease
KO
K07091
lipopolysaccharide export system permease protein
Organism
chim Chitinophaga sp. MD30
Pathway
chim02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CK934_08050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chim02000
]
CK934_08050
Transporters [BR:
chim02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
CK934_08050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
PPP1R21_C
Motif
Other DBs
NCBI-ProteinID:
ASZ10930
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All DBs
Position
complement(2033359..2034795)
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AA seq
478 aa
AA seq
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MKKLDKLIIKTFLGPFVATFFVTLFVLVMQFLWKYIDDLVGKGLDTPVIIELLTYTGASL
VQLALPLAVLLASIMTFGNLGESFELVALKSSGISLLRFIRPLMFVCAFISFLAFLFANY
VIPVANLRAKSLLYDITNSKPAFNIKAGVFYTDIPGYTIKVAQKEKDNKTIHQVMIYDQQ
SGGGSKLILAKKGTMMLSKDKRFLYFVLEDGWRYEERNNRGYGTPGELIRIGFKQYRKAF
DLASFAFNRLDVNLFASNQQMLNVRQLDKAIDSLVKEEKVFSRTVNSYVTSRYPFYKWKD
TGWAKTVAPLHVSRFEDIIPIKSRRYSIDRAEQNIRDLQSNLETPAKSYEDKHAIMLLHK
VEWQRKFTLAAACLVMFLIGAPLGSIIRKGGLGTPLVFAVIFFVIFNIFFMVGEKMARKD
VMTTWSGMWLSNIVLLPIAAFLIYKAMNDSQLFNKEYYFRILHKIRKFLQKYKAKPTT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaactggacaaactcatcataaaaactttcctggggccttttgtggctacattc
tttgtgaccctgttcgttttggtgatgcagtttttgtggaaatacattgatgacctggtt
ggtaaggggttggatacgccggttatcattgagttgctgacgtatacgggagcgagcctg
gtgcagttggcgttgccgctggcggtgctgttggcttcgatcatgacctttggtaacctg
ggggagagttttgagttggtggcgttgaagtcgtcggggatttcgttgttacgatttatc
cggccgttgatgtttgtgtgtgcttttatttccttcctggcttttttatttgccaactat
gtgatcccggtggcgaacctgcgcgccaagtcgttgttgtacgacattaccaattccaaa
cctgcttttaatatcaaggccggggtattctatacggatattccgggttatacgatcaag
gttgctcagaaggagaaagataacaagaccattcaccaggtgatgatctatgatcagcaa
tcggggggtggcagtaagttgatactggcgaagaaggggacgatgatgttatcgaaggat
aagcgtttcctttattttgtactggaggatggctggcgttatgaggagcggaacaaccgg
ggttatggtacgccgggggagttgatccggatagggttcaagcagtaccggaaggcgttt
gacctggcttcttttgcctttaaccgattggatgtgaacctgtttgcttctaaccagcag
atgttgaatgtgcggcagttggacaaggcgatcgattctttggtgaaggaggagaaggta
ttttcgcggacagtgaactcatatgtgacgtcacgttatcctttttacaagtggaaggat
acgggatgggcgaagacggtggctcccttgcatgtgtcgcggtttgaggacataataccg
atcaaatccaggcgttatagtatagaccgggcggagcagaatatccgggacctgcagagt
aacctggagactcctgccaaaagttatgaggacaagcacgctattatgttgctacataag
gtagaatggcagcgtaagtttacgttggcagcggcatgtctggtgatgttcctgataggt
gctccgctggggtctatcatccggaagggtggtttgggtacaccattggtgtttgcggtg
atcttttttgtaatttttaacattttctttatggtaggggaaaagatggcccggaaggac
gtgatgaccacgtggagcgggatgtggctgtctaacattgtgctcctacccatagctgcg
ttcctcatttataaggccatgaatgactcgcaactgttcaataaagaatattattttcgg
atattgcataaaatacgaaagttcttacagaagtataaggcaaaacctacaacctaa
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