Chitinophaga sp. MD30: CK934_08065
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Entry
CK934_08065 CDS
T10354
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
chim Chitinophaga sp. MD30
Pathway
chim02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CK934_08065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chim03021
]
CK934_08065
Transcription machinery [BR:
chim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CK934_08065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
HTH_28
UPF0122
KORA
Motif
Other DBs
NCBI-ProteinID:
ASZ10933
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All DBs
Position
2036328..2037197
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AA seq
289 aa
AA seq
DB search
MRQLKITKSITNRESQSLEKYLQEIGKVDLITPEEEVNLAIRIKQGDQRALEKLTKANLR
FVVSVAKQYQNQGLSLSDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKVGLSNKISKAYSQLEQEFEREPSPDELATILEINTEEVEATLGVAARHV
SMDAPFIDGEDNSLLDVLANPNAVNADEELDHHDSLRREIERSLSTLTDRQKDVIILYFG
IAVEHPMSLEDIGEKFGLTRERVRQIKDKAITKLRTTSRSKLLRNYLGS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaactcaaaatcactaaatccatcacaaacagggaatcacaatccctggaaaag
tacttgcaggaaatcggtaaggtggatttaatcacaccagaggaggaagtgaatctggcg
atcagaatcaaacaaggcgatcagcgcgcattggaaaagctgacaaaagcaaaccttcgc
tttgtagtgtcagtggccaaacagtatcagaaccaaggcctctccctcagtgatctcatc
aatgaaggaaacctcggtctgattaaagctgcccaacgctttgacgaaacaagaggattc
aaattcatctcctacgccgtatggtggatccgtcaatccatcctccaggcactggccgaa
caatcccgcatcgtacgcctcccactcaataaagtgggcctcagcaataagatcagcaaa
gcatactcccagctcgaacaggaattcgaaagagaaccttccccggatgaactggccact
atcctcgaaatcaacacagaagaggtagaagccaccctcggtgtagctgcccgccacgtt
tccatggacgcgcccttcatcgatggcgaagacaacagcttgctagacgtactcgccaat
ccaaacgccgttaacgcagacgaagaactggaccaccacgactccctgcgccgggaaata
gaaagatccttgtccacactcaccgaccgccagaaagatgtgatcatcctgtacttcggc
atcgccgtagaacaccccatgtccctcgaagatatcggcgagaaattcggcctcaccaga
gaacgcgtaaggcagatcaaagacaaggcaatcactaaactcagaactacctcccgcagc
aaactgctgcgcaactatctcggtagctga
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