Chitinophaga sp. MD30: CK934_08105
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Entry
CK934_08105 CDS
T10354
Name
(GenBank) hypothetical protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
chim Chitinophaga sp. MD30
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chim01011
]
CK934_08105
Enzymes [BR:
chim01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CK934_08105
Peptidoglycan biosynthesis and degradation proteins [BR:
chim01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CK934_08105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
ASZ10941
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Position
2043173..2044429
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AA seq
418 aa
AA seq
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MCMRKIFLLVLLPALGIGSVNAATGNSNPKGIPTSPRQEMSDTSILVHKVKLPKDTTVRA
SATSIAVKKAAESLPSSIRSAKVYEQINNNIVAGYVSNYATRYSQHLQLMVSRGEPYFVM
IEKIFREHGIPEEMKYLAVIESSFNTSARSRVGAVGTWQFMSGTARIFGLSVGRKVDERK
DFYKSTIAAAKYLNELYDRFGDWLLVVAAYNCGPGGVLKAMKVSGREDFWGMQYFLPTES
RNHVYKFVATGYILDRFNNFFGVGAAENAAMAIATEAPKAALTEDEIYSTVEFNISGKYK
LEAIAKKLDMEVAALDHLNPGFAKTMSGPDNSYDLRIPQEKMKLFMAQKEEILKESLQMT
LDDKAVAADKSKFPPPAKRPAVSENTKKTTATHSHKSKKTTKHTTAARKKRSTSAKKK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatgaggaaaatctttttactagtgctgttgcccgcgttgggaataggaagtgtg
aacgcggccacaggcaatagcaatcctaaagggatcccaacttcaccacgacaggaaatg
tccgatacatccatcctggtgcataaagtgaagttacccaaggacactactgttagggct
tccgctacctccatagcggtaaagaaggccgctgaaagccttccttctagcatccgcagt
gcaaaagtctatgagcagatcaataacaacatcgtagccggttacgtaagcaactacgcc
acccgctatagccaacatctgcaattaatggtctccagaggagaaccctacttcgtaatg
atcgaaaagatcttccgcgaacatggtatcccggaagaaatgaaatacctggccgttatc
gaatccagcttcaacaccagcgcacgctccagagtaggcgccgtaggaacctggcaattc
atgtccggtacagccaggatcttcggcctcagcgtaggtagaaaagtagacgaacgcaaa
gacttctacaaatccaccatcgccgccgccaaatacctcaacgaattgtatgaccgcttc
ggcgattggctgctcgtagtagccgcatacaactgcggacccggtggcgttctcaaagcc
atgaaagtaagcggccgcgaagacttctggggtatgcagtatttcctgcccacagaatcc
cgcaaccacgtatacaaattcgtcgctaccggttatatcctcgacagattcaacaacttc
ttcggtgtaggcgccgctgaaaatgccgctatggccatcgccacagaagctcctaaagca
gctctcacagaagatgaaatatacagcaccgtagaatttaatatcagcggtaagtataaa
ctggaagcaatcgctaagaaactggacatggaagtggccgcactcgaccacctcaaccca
ggcttcgccaaaacaatgtccggcccggacaatagctatgatttgcggataccacaggag
aagatgaaactcttcatggcacagaaagaagaaatactgaaagagtcactacaaatgacc
ctcgacgacaaagccgtagcagcagataaatctaagttccccccaccagccaaacgtccg
gctgttagcgagaacacaaagaaaactaccgctacccacagccataagagcaagaaaaca
acaaagcataccactgctgccagaaaaaaacgtagcacgtctgctaaaaagaaatag
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