Chitinophaga sp. MD30: CK934_09315
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Entry
CK934_09315 CDS
T10354
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
chim Chitinophaga sp. MD30
Pathway
chim00521
Streptomycin biosynthesis
chim00523
Polyketide sugar unit biosynthesis
chim00525
Acarbose and validamycin biosynthesis
chim00541
Biosynthesis of various nucleotide sugars
chim01100
Metabolic pathways
chim01110
Biosynthesis of secondary metabolites
chim01250
Biosynthesis of nucleotide sugars
Module
chim_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CK934_09315 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CK934_09315 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CK934_09315 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CK934_09315 (rfbB)
00525 Acarbose and validamycin biosynthesis
CK934_09315 (rfbB)
Enzymes [BR:
chim01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CK934_09315 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
NmrA
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
ASZ11146
UniProt:
A0A249SU31
LinkDB
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Position
complement(2354328..2355380)
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AA seq
350 aa
AA seq
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MRKILITGGAGFIGSHVVRLFVNKYPDYQIFNLDALTYAGNLENLADIRDSKNYTFIKGD
ITDEAFINDLFETHGFNGVIHLAAESHVDRSIMDPLAFIRTNVLGTAVLLNAARKCWKDD
MNGKLFYHVSTDEVYGSLGEEGFFTEDTSYDPRSPYSASKASSDHFVMAYHHTYHLPVIM
SNCSNNYGSHHFPEKLIPLAIHNIKNSKPVPVYGTGENVRDWLFVEDHARAIDTIFHQGQ
PGGKYNIGGFNEWKNIDLIQLLCSIMDKKLGREAGTSAQLITFVKDRAGHDQRYAIDATK
LNKELGWEPSLQFEEGLEKTVDWYLANEEWLEHVTSGTYQQYYTEQYQQR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagatcttaataacagggggcgctggatttattggttctcatgtagtaaggctc
tttgtgaataaatatccggactaccagatattcaacctggacgcgctgacctatgccggc
aacctggaaaatcttgccgacatccgcgatagtaaaaactacaccttcatcaaaggagac
attaccgatgaagcattcataaatgacctgttcgaaacccatggtttcaatggcgttatc
cacctggccgctgaaagccatgtagatcgctctatcatggaccctctggcattcattcgt
actaacgtcctgggtaccgccgtactgctaaacgccgcccgcaaatgctggaaagatgat
atgaatggcaaactgttctatcatgtatccaccgatgaagtatacggctcgctgggcgaa
gaaggtttctttacagaagatacctcctacgatccccgctccccctattcagcctccaaa
gccagttcggaccacttcgtgatggcataccatcacacctatcacctgccggtgatcatg
tccaactgctccaataactacggctcccaccacttcccggaaaagctgatccctttagct
atccacaatatcaaaaacagtaaaccagtacccgtatatggtacaggagagaacgtacgc
gactggctcttcgtagaagaccatgcccgtgcgatcgataccatcttccatcaaggacaa
cctggcggtaaatacaatatcggcggcttcaatgagtggaaaaacatcgacctcatccaa
ctgctttgcagtattatggataaaaaactcggcagggaagccggtacctccgcacagctg
atcaccttcgtgaaagaccgcgcaggccacgatcaacgatatgcgatcgatgctaccaaa
ctgaataaggaactcggctgggaaccttccctgcaatttgaggaaggactggaaaaaaca
gtagactggtacctggctaacgaagagtggctggaacatgtgaccagtggtacctatcag
caatactatacggaacaataccaacagcggtaa
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